Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
UBA52P62987 AL022342.1-201ENST00000400363 863 ntBASIC14.86□□□□□ -0.03
UBA52P62987 AC079781.3-201ENST00000449110 356 ntBASIC14.86□□□□□ -0.03
UBA52P62987 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC14.86□□□□□ -0.03
UBA52P62987 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
UBA52P62987 PPP1R1B-208ENST00000580825 1038 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
UBA52P62987 AC090616.6-201ENST00000582640 721 ntBASIC14.86□□□□□ -0.03
UBA52P62987 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC14.86□□□□□ -0.03
UBA52P62987 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC14.86□□□□□ -0.03
UBA52P62987 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 TSPY26P-202ENST00000565928 3884 ntBASIC14.86□□□□□ -0.03
UBA52P62987 AC026412.1-202ENST00000512335 2231 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 AL109659.2-201ENST00000606809 1674 ntBASIC14.86□□□□□ -0.03
UBA52P62987 RAB1A-203ENST00000409784 2447 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.86□□□□□ -0.03
UBA52P62987 DLG4-201ENST00000302955 3184 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
UBA52P62987 DLG4-202ENST00000399506 3185 ntAPPRIS ALT1 TSL 2 BASIC14.86□□□□□ -0.03
UBA52P62987 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC14.86□□□□□ -0.03
UBA52P62987 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 PCDHGA11-202ENST00000518882 2263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
UBA52P62987 RCC2P3-201ENST00000418112 1537 ntBASIC14.86□□□□□ -0.03
UBA52P62987 HOXB3-205ENST00000470495 4208 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC14.86□□□□□ -0.03
UBA52P62987 GRAMD1A-202ENST00000411896 2523 ntAPPRIS ALT2 TSL 2 BASIC14.86□□□□□ -0.03
UBA52P62987 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC14.86□□□□□ -0.03
UBA52P62987 SCAF1-201ENST00000360565 4306 ntAPPRIS P2 TSL 2 BASIC14.85□□□□□ -0.03
UBA52P62987 BANP-201ENST00000286122 2368 ntTSL 5 BASIC14.85□□□□□ -0.03
UBA52P62987 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
UBA52P62987 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC14.85□□□□□ -0.03
UBA52P62987 ZNF655-202ENST00000320583 1601 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 HDAC5-201ENST00000225983 5326 ntAPPRIS P3 TSL 5 BASIC14.85□□□□□ -0.03
UBA52P62987 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC14.85□□□□□ -0.03
UBA52P62987 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
UBA52P62987 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 PHOSPHO2-201ENST00000359744 1125 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC14.85□□□□□ -0.03
UBA52P62987 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UBA52P62987 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC14.85□□□□□ -0.03
UBA52P62987 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC14.85□□□□□ -0.03
UBA52P62987 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC14.85□□□□□ -0.03
UBA52P62987 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC14.85□□□□□ -0.03
UBA52P62987 AP003733.1-201ENST00000491725 852 ntBASIC14.85□□□□□ -0.03
UBA52P62987 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC14.85□□□□□ -0.03
UBA52P62987 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 AC104390.1-201ENST00000555663 520 ntBASIC14.85□□□□□ -0.03
UBA52P62987 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC14.85□□□□□ -0.03
UBA52P62987 AC005332.3-201ENST00000589904 676 ntBASIC14.85□□□□□ -0.03
UBA52P62987 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
UBA52P62987 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC14.85□□□□□ -0.03
UBA52P62987 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UBA52P62987 SBNO2-202ENST00000438103 4537 ntAPPRIS ALT2 TSL 2 BASIC14.85□□□□□ -0.03
UBA52P62987 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
UBA52P62987 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 ASAH1-201ENST00000262097 2618 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.85□□□□□ -0.03
UBA52P62987 ITGA3-202ENST00000320031 4888 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 MGME1-201ENST00000377704 1781 ntTSL 3 BASIC14.85□□□□□ -0.03
UBA52P62987 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 AC092850.2-201ENST00000623821 2697 ntBASIC14.85□□□□□ -0.03
UBA52P62987 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 ACTRT3-201ENST00000330368 2005 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 TBC1D10B-201ENST00000409939 3350 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC14.85□□□□□ -0.03
UBA52P62987 BANP-204ENST00000393208 2283 ntTSL 2 BASIC14.85□□□□□ -0.03
UBA52P62987 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.85□□□□□ -0.03
UBA52P62987 KLF10-202ENST00000395884 3659 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 DNAJC10-210ENST00000616986 5783 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
UBA52P62987 HOXB1-202ENST00000577092 1414 ntBASIC14.84□□□□□ -0.03
UBA52P62987 TWIST2-202ENST00000612363 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 ABHD15-201ENST00000307201 3592 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 AC133963.1-201ENST00000504166 1679 ntBASIC14.84□□□□□ -0.03
UBA52P62987 SSH3-201ENST00000308127 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 ZMIZ1-205ENST00000611351 2196 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 SLC35E2B-204ENST00000614300 2156 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 GPR158-AS1-201ENST00000449643 2433 ntTSL 2 BASIC14.84□□□□□ -0.03
UBA52P62987 SPAG9-205ENST00000505279 4659 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 CDC25B-202ENST00000340833 1978 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 TMUB2-209ENST00000587989 1969 ntAPPRIS ALT1 TSL 3 BASIC14.84□□□□□ -0.03
UBA52P62987 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 KCNC1-202ENST00000379472 7965 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 PCBP4-202ENST00000355852 2015 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 TMEM104-202ENST00000417024 1781 ntTSL 2 BASIC14.84□□□□□ -0.03
UBA52P62987 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
UBA52P62987 ENSA-205ENST00000361532 792 ntTSL 2 BASIC14.84□□□□□ -0.03
UBA52P62987 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC14.84□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms