Protein–RNA interactions for Protein: P62891

RPL39, 60S ribosomal protein L39, humanhuman

Known RBP Predictions only

Length 51 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39P62891 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RPL39P62891 AC124947.2-201ENST00000547118 1133 ntBASIC12.16□□□□□ -0.46
RPL39P62891 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC12.16□□□□□ -0.46
RPL39P62891 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC12.16□□□□□ -0.46
RPL39P62891 AC142381.4-202ENST00000563973 229 ntBASIC12.16□□□□□ -0.46
RPL39P62891 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
RPL39P62891 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC12.16□□□□□ -0.46
RPL39P62891 AC004263.2-201ENST00000617183 678 ntBASIC12.16□□□□□ -0.46
RPL39P62891 PGBD5-201ENST00000391860 10961 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPL39P62891 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPL39P62891 BANP-201ENST00000286122 2368 ntTSL 5 BASIC12.16□□□□□ -0.46
RPL39P62891 SDCBP2-201ENST00000339987 1404 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPL39P62891 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC12.16□□□□□ -0.46
RPL39P62891 SH3BP2-207ENST00000503393 9158 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RPL39P62891 AC105917.1-201ENST00000506637 2539 ntBASIC12.16□□□□□ -0.46
RPL39P62891 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPL39P62891 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
RPL39P62891 NORAD-201ENST00000565493 5339 ntBASIC12.16□□□□□ -0.46
RPL39P62891 PHLDB1-202ENST00000361417 5753 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPL39P62891 TPD52L2-204ENST00000351424 2302 ntAPPRIS P4 TSL 2 BASIC12.16□□□□□ -0.46
RPL39P62891 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC12.16□□□□□ -0.46
RPL39P62891 CD151-213ENST00000528011 1369 ntAPPRIS ALT1 TSL 5 BASIC12.16□□□□□ -0.46
RPL39P62891 CPSF4-201ENST00000292476 1691 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPL39P62891 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
RPL39P62891 SEPT8-204ENST00000378699 2289 ntTSL 5 BASIC12.16□□□□□ -0.46
RPL39P62891 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
RPL39P62891 TUBB4A-201ENST00000264071 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPL39P62891 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPL39P62891 ZNF764-201ENST00000252797 2738 ntAPPRIS P3 TSL 1 (best) BASIC12.16□□□□□ -0.46
RPL39P62891 ANKRD26P3-201ENST00000454044 2748 ntBASIC12.16□□□□□ -0.46
RPL39P62891 SIK3-205ENST00000446921 3858 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 EML3-202ENST00000394773 3256 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 RBBP7-204ENST00000404022 1904 ntTSL 5 BASIC12.15□□□□□ -0.46
RPL39P62891 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC12.15□□□□□ -0.46
RPL39P62891 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC12.15□□□□□ -0.46
RPL39P62891 KRT89P-201ENST00000620027 1478 ntBASIC12.15□□□□□ -0.46
RPL39P62891 CYB561-205ENST00000542042 1302 ntTSL 2 BASIC12.15□□□□□ -0.46
RPL39P62891 NID2-208ENST00000617139 3827 ntTSL 5 BASIC12.15□□□□□ -0.46
RPL39P62891 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 AC136759.1-201ENST00000534201 2163 ntTSL 2 BASIC12.15□□□□□ -0.46
RPL39P62891 ABCB6-201ENST00000265316 3016 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC12.15□□□□□ -0.46
RPL39P62891 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
RPL39P62891 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC12.15□□□□□ -0.46
RPL39P62891 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC12.15□□□□□ -0.46
RPL39P62891 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC12.15□□□□□ -0.46
RPL39P62891 NEK4P2-201ENST00000580004 1012 ntBASIC12.15□□□□□ -0.46
RPL39P62891 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC12.15□□□□□ -0.46
RPL39P62891 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC12.15□□□□□ -0.46
RPL39P62891 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 TMTC2-203ENST00000548305 2682 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC12.15□□□□□ -0.46
RPL39P62891 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC12.15□□□□□ -0.46
RPL39P62891 SLC9A7P1-201ENST00000554295 3311 ntBASIC12.15□□□□□ -0.46
RPL39P62891 ONECUT1-201ENST00000305901 2092 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 EPHX2-201ENST00000380476 2064 ntTSL 2 BASIC12.15□□□□□ -0.46
RPL39P62891 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 SYNRG-222ENST00000614941 3406 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
RPL39P62891 RUSC1-201ENST00000292254 2163 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.47
RPL39P62891 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.47
RPL39P62891 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 PRICKLE1-211ENST00000639566 3341 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
RPL39P62891 PLEKHA8-205ENST00000449726 7835 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 MBP-202ENST00000355994 2772 ntTSL 5 BASIC12.14□□□□□ -0.47
RPL39P62891 FAM104A-201ENST00000403627 2798 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 PRX-201ENST00000291825 5502 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 HSD3B7-201ENST00000262520 2200 ntTSL 2 BASIC12.14□□□□□ -0.47
RPL39P62891 TLE2-203ENST00000443826 2238 ntTSL 2 BASIC12.14□□□□□ -0.47
RPL39P62891 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
RPL39P62891 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC12.14□□□□□ -0.47
RPL39P62891 H1F0-201ENST00000340857 2344 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
RPL39P62891 SPOCK2-202ENST00000373109 5445 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 SLC17A9-201ENST00000370349 2594 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 ANKS6-202ENST00000375019 2586 ntTSL 5 BASIC12.14□□□□□ -0.47
RPL39P62891 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC12.14□□□□□ -0.47
RPL39P62891 CEP72-201ENST00000264935 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 F7-201ENST00000346342 2409 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 METTL21C-201ENST00000267273 1088 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 TSPY14P-201ENST00000303979 915 ntBASIC12.14□□□□□ -0.47
RPL39P62891 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 BX322234.1-201ENST00000444188 980 ntTSL 3 BASIC12.14□□□□□ -0.47
RPL39P62891 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC12.14□□□□□ -0.47
RPL39P62891 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC12.14□□□□□ -0.47
RPL39P62891 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC12.14□□□□□ -0.47
RPL39P62891 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC12.14□□□□□ -0.47
RPL39P62891 SIGLEC7-202ENST00000317643 1754 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
RPL39P62891 PRKX-201ENST00000262848 6031 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 98,524 protein–RNA pairs in 37.8 ms