Protein–RNA interactions for Protein: P61073

CXCR4, C-X-C chemokine receptor type 4, humanhuman

Predictions only

Length 352 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCR4P61073 LRFN2-201ENST00000338305 3270 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCR4P61073 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.65■□□□□ 0.1
CXCR4P61073 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC15.65■□□□□ 0.1
CXCR4P61073 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC15.65■□□□□ 0.1
CXCR4P61073 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.65■□□□□ 0.1
CXCR4P61073 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC15.64■□□□□ 0.1
CXCR4P61073 MAGEA2B-201ENST00000331220 1946 ntAPPRIS P1 TSL 2 BASIC15.64■□□□□ 0.09
CXCR4P61073 FAM189B-202ENST00000361361 3082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 LINC01568-207ENST00000641790 1380 ntBASIC15.64■□□□□ 0.09
CXCR4P61073 SEPT5-204ENST00000406395 1974 ntTSL 5 BASIC15.64■□□□□ 0.09
CXCR4P61073 ME2P1-201ENST00000426028 1970 ntBASIC15.64■□□□□ 0.09
CXCR4P61073 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 SIGLEC10-205ENST00000439889 2126 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 ADAM8-205ENST00000485491 2441 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCR4P61073 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 MRPL49-201ENST00000279242 2019 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCR4P61073 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC15.64■□□□□ 0.09
CXCR4P61073 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCR4P61073 APLN-201ENST00000429967 3205 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 SRPX-202ENST00000432886 1725 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCR4P61073 AL391256.1-201ENST00000443260 1855 ntBASIC15.64■□□□□ 0.09
CXCR4P61073 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC15.64■□□□□ 0.09
CXCR4P61073 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
CXCR4P61073 AC021739.3-201ENST00000557908 855 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCR4P61073 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC15.64■□□□□ 0.09
CXCR4P61073 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC15.64■□□□□ 0.09
CXCR4P61073 AC004263.2-201ENST00000617183 678 ntBASIC15.64■□□□□ 0.09
CXCR4P61073 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCR4P61073 PCSK4-201ENST00000300954 2661 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 AL391807.1-203ENST00000604392 2365 ntBASIC15.64■□□□□ 0.09
CXCR4P61073 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC15.64■□□□□ 0.09
CXCR4P61073 HYMAI-201ENST00000635591 3347 ntBASIC15.64■□□□□ 0.09
CXCR4P61073 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC15.64■□□□□ 0.09
CXCR4P61073 GFOD2-201ENST00000268797 2126 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 ABTB1-202ENST00000453791 1961 ntTSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 KCNC2-209ENST00000550433 2931 ntAPPRIS ALT2 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 SMG1P3-206ENST00000522841 2774 ntTSL 2 BASIC15.64■□□□□ 0.09
CXCR4P61073 LYNX1-206ENST00000621401 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
CXCR4P61073 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 TMED7-TICAM2-201ENST00000282382 3491 ntAPPRIS P1 TSL 2 BASIC15.63■□□□□ 0.09
CXCR4P61073 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCR4P61073 C16orf89-201ENST00000315997 1872 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 FTSJ1-202ENST00000348411 1892 ntAPPRIS P4 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 EGFR-203ENST00000344576 2864 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 WDR74-205ENST00000525752 1724 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCR4P61073 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCR4P61073 NRXN1-229ENST00000628515 3243 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCR4P61073 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCR4P61073 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCR4P61073 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCR4P61073 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCR4P61073 LFNG-205ENST00000402506 2268 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCR4P61073 MYCBPAP-203ENST00000436259 3102 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
CXCR4P61073 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCR4P61073 PAQR6-204ENST00000356983 2143 ntAPPRIS ALT1 TSL 2 BASIC15.63■□□□□ 0.09
CXCR4P61073 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC15.63■□□□□ 0.09
CXCR4P61073 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC15.63■□□□□ 0.09
CXCR4P61073 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 TSPY12P-201ENST00000421279 868 ntBASIC15.63■□□□□ 0.09
CXCR4P61073 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CXCR4P61073 RASA4DP-201ENST00000460726 1199 ntBASIC15.63■□□□□ 0.09
CXCR4P61073 CNP-204ENST00000472031 1019 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCR4P61073 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC15.63■□□□□ 0.09
CXCR4P61073 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCR4P61073 TMA16-209ENST00000513272 803 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCR4P61073 AL136038.4-201ENST00000603606 1261 ntBASIC15.63■□□□□ 0.09
CXCR4P61073 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.63■□□□□ 0.09
CXCR4P61073 AC107871.1-202ENST00000562767 3389 ntAPPRIS P1 TSL 3 BASIC15.63■□□□□ 0.09
CXCR4P61073 PPP1CB-202ENST00000358506 4771 ntAPPRIS P1 TSL 5 BASIC15.63■□□□□ 0.09
CXCR4P61073 PLEKHN1-201ENST00000379407 2194 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
CXCR4P61073 PAPOLB-201ENST00000404991 4262 ntAPPRIS P1 BASIC15.63■□□□□ 0.09
CXCR4P61073 CADPS2-204ENST00000412584 4308 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 46 ms