Protein–RNA interactions for Protein: P56747

CLDN6, Claudin-6, humanhuman

Predictions only

Length 220 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN6P56747 AC140658.5-201ENST00000438532 169 ntBASIC16.42■□□□□ 0.22
CLDN6P56747 SNCA-209ENST00000506244 570 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
CLDN6P56747 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC16.42■□□□□ 0.22
CLDN6P56747 AC107918.2-201ENST00000530817 355 ntBASIC16.42■□□□□ 0.22
CLDN6P56747 SLC25A39P2-201ENST00000537614 270 ntBASIC16.42■□□□□ 0.22
CLDN6P56747 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC16.42■□□□□ 0.22
CLDN6P56747 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN6P56747 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN6P56747 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN6P56747 HYAL3-207ENST00000621157 1696 ntAPPRIS P1 TSL 5 BASIC16.42■□□□□ 0.22
CLDN6P56747 NTNG1-203ENST00000370066 1443 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN6P56747 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
CLDN6P56747 EWSR1-207ENST00000406548 2207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN6P56747 AC008677.1-201ENST00000519230 1561 ntBASIC16.42■□□□□ 0.22
CLDN6P56747 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC16.42■□□□□ 0.22
CLDN6P56747 BSG-215ENST00000618006 1329 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN6P56747 WNT8B-201ENST00000343737 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN6P56747 TTC22-201ENST00000371274 2149 ntTSL 2 BASIC16.42■□□□□ 0.22
CLDN6P56747 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
CLDN6P56747 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 LRP3-201ENST00000253193 3807 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
CLDN6P56747 CHRAC1-201ENST00000220913 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN6P56747 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
CLDN6P56747 PSTPIP1-201ENST00000379595 1840 ntAPPRIS ALT1 TSL 5 BASIC16.41■□□□□ 0.22
CLDN6P56747 AMT-250ENST00000637682 1823 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN6P56747 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC16.41■□□□□ 0.22
CLDN6P56747 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 RNF212-203ENST00000433731 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 SPCS2P4-201ENST00000436160 681 ntBASIC16.41■□□□□ 0.22
CLDN6P56747 TSFM-210ENST00000550559 897 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN6P56747 AC005225.4-201ENST00000557330 545 ntBASIC16.41■□□□□ 0.22
CLDN6P56747 COX5A-203ENST00000564811 568 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC16.41■□□□□ 0.22
CLDN6P56747 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 MTX1-207ENST00000609421 1085 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLDN6P56747 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
CLDN6P56747 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 ZDHHC19-201ENST00000296326 1306 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLDN6P56747 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC16.41■□□□□ 0.22
CLDN6P56747 AC063926.2-201ENST00000623766 1308 ntBASIC16.41■□□□□ 0.22
CLDN6P56747 FAM57B-201ENST00000279389 1481 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLDN6P56747 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
CLDN6P56747 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
CLDN6P56747 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.41■□□□□ 0.22
CLDN6P56747 PDHX-203ENST00000448838 2653 ntTSL 5 BASIC16.41■□□□□ 0.22
CLDN6P56747 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN6P56747 WIPF1-206ENST00000409891 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
CLDN6P56747 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
CLDN6P56747 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN6P56747 DFFA-201ENST00000377036 1403 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC16.4■□□□□ 0.22
CLDN6P56747 EIF5A-201ENST00000336452 1256 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 LRRC37A5P-201ENST00000374304 1103 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 WRB-204ENST00000398753 699 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN6P56747 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN6P56747 AC107890.1-201ENST00000422478 521 ntBASIC16.4■□□□□ 0.22
CLDN6P56747 AC007274.1-201ENST00000439805 662 ntBASIC16.4■□□□□ 0.22
CLDN6P56747 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN6P56747 ZNF789-211ENST00000493485 556 ntTSL 4 BASIC16.4■□□□□ 0.22
CLDN6P56747 AP005018.1-201ENST00000525475 301 ntBASIC16.4■□□□□ 0.22
CLDN6P56747 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN6P56747 LINC02560-201ENST00000596379 459 ntBASIC16.4■□□□□ 0.22
CLDN6P56747 SBK3-202ENST00000612221 1270 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN6P56747 BSG-214ENST00000614867 960 ntTSL 3 BASIC16.4■□□□□ 0.22
CLDN6P56747 HIST1H3D-202ENST00000635200 948 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
CLDN6P56747 RAB34-224ENST00000636513 888 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN6P56747 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 KDELC1-201ENST00000376004 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 CLN3-229ENST00000567963 1452 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN6P56747 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 ERICH1-201ENST00000262109 1813 ntAPPRIS P2 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN6P56747 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
CLDN6P56747 PPP2R2C-206ENST00000507294 1667 ntTSL 2 BASIC16.4■□□□□ 0.22
CLDN6P56747 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
CLDN6P56747 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
CLDN6P56747 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.4■□□□□ 0.22
CLDN6P56747 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
CLDN6P56747 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.39■□□□□ 0.21
CLDN6P56747 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms