Protein–RNA interactions for Protein: P54277

PMS1, PMS1 protein homolog 1, humanhuman

Known RBP Predictions only

Length 932 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1P54277 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC18.84■□□□□ 0.61
PMS1P54277 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC18.84■□□□□ 0.61
PMS1P54277 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC18.84■□□□□ 0.61
PMS1P54277 WT1-209ENST00000530998 2421 ntTSL 2 BASIC18.84■□□□□ 0.61
PMS1P54277 TEX264-209ENST00000457573 1448 ntAPPRIS P3 TSL 5 BASIC18.84■□□□□ 0.61
PMS1P54277 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
PMS1P54277 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC18.84■□□□□ 0.61
PMS1P54277 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 AL603756.1-201ENST00000606511 2163 ntBASIC18.84■□□□□ 0.61
PMS1P54277 TSNARE1-205ENST00000520166 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC18.84■□□□□ 0.61
PMS1P54277 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC18.84■□□□□ 0.61
PMS1P54277 LSM5-204ENST00000409909 740 ntTSL 2 BASIC18.84■□□□□ 0.61
PMS1P54277 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC18.84■□□□□ 0.61
PMS1P54277 REPIN1-203ENST00000444957 2969 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 HOXB-AS4-202ENST00000480386 566 ntTSL 4 BASIC18.84■□□□□ 0.61
PMS1P54277 SKP2-204ENST00000508514 821 ntTSL 3 BASIC18.84■□□□□ 0.61
PMS1P54277 NMU-205ENST00000511469 756 ntTSL 3 BASIC18.84■□□□□ 0.61
PMS1P54277 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC18.84■□□□□ 0.61
PMS1P54277 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
PMS1P54277 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 AP000547.2-201ENST00000609641 661 ntTSL 5 BASIC18.84■□□□□ 0.61
PMS1P54277 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC18.84■□□□□ 0.61
PMS1P54277 ZNF503-201ENST00000372524 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC18.84■□□□□ 0.61
PMS1P54277 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC18.84■□□□□ 0.61
PMS1P54277 SYNDIG1L-202ENST00000554823 2420 ntAPPRIS P1 TSL 3 BASIC18.84■□□□□ 0.61
PMS1P54277 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
PMS1P54277 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 FHL1-207ENST00000394155 2706 ntTSL 5 BASIC18.84■□□□□ 0.61
PMS1P54277 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 PEA15-202ENST00000368076 2694 ntTSL 2 BASIC18.84■□□□□ 0.61
PMS1P54277 DPP6-202ENST00000377770 3710 ntAPPRIS P4 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 IFNL4-204ENST00000634967 1493 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 STXBP1-216ENST00000636962 2918 ntTSL 5 BASIC18.84■□□□□ 0.61
PMS1P54277 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
PMS1P54277 AZIN2-203ENST00000373441 1443 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PMS1P54277 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PMS1P54277 SCRN2-202ENST00000407215 1779 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PMS1P54277 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PMS1P54277 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PMS1P54277 PCDH8P1-201ENST00000428983 2773 ntBASIC18.83■□□□□ 0.61
PMS1P54277 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
PMS1P54277 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC18.83■□□□□ 0.61
PMS1P54277 TEX13A-201ENST00000600991 1377 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PMS1P54277 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
PMS1P54277 YTHDF3-215ENST00000621957 2387 ntAPPRIS ALT1 TSL 5 BASIC18.83■□□□□ 0.61
PMS1P54277 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.61
PMS1P54277 AL590787.1-201ENST00000568856 1315 ntBASIC18.83■□□□□ 0.61
PMS1P54277 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 AL031587.1-201ENST00000410099 1055 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC18.83■□□□□ 0.6
PMS1P54277 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 AC105202.1-201ENST00000517833 995 ntTSL 3 BASIC18.83■□□□□ 0.6
PMS1P54277 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC18.83■□□□□ 0.6
PMS1P54277 NKAPP1-205ENST00000585790 367 ntBASIC18.83■□□□□ 0.6
PMS1P54277 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC18.83■□□□□ 0.6
PMS1P54277 WASF1-206ENST00000392588 3122 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PMS1P54277 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PMS1P54277 LEF1-201ENST00000265165 3068 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 TRIM11-201ENST00000284551 2715 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 FAM210B-201ENST00000371384 3046 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC18.83■□□□□ 0.6
PMS1P54277 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 DOLK-201ENST00000372586 2090 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PMS1P54277 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC18.83■□□□□ 0.6
PMS1P54277 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 FZD1-201ENST00000287934 6963 ntAPPRIS P1 BASIC18.83■□□□□ 0.6
PMS1P54277 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
PMS1P54277 EIF4A3-201ENST00000269349 1734 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
PMS1P54277 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 ESM1-201ENST00000381403 1326 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC18.82■□□□□ 0.6
PMS1P54277 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC18.82■□□□□ 0.6
PMS1P54277 AL662844.4-201ENST00000606367 2838 ntBASIC18.82■□□□□ 0.6
PMS1P54277 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
PMS1P54277 AP002414.1-201ENST00000391405 1147 ntBASIC18.82■□□□□ 0.6
PMS1P54277 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC18.82■□□□□ 0.6
PMS1P54277 HCG4P8-203ENST00000443049 980 ntBASIC18.82■□□□□ 0.6
PMS1P54277 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.82■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 111.8 ms