Protein–RNA interactions for Protein: P53708

ITGA8, Integrin alpha-8, humanhuman

Predictions only

Length 1,063 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITGA8P53708 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ITGA8P53708 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ITGA8P53708 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 PDK1-203ENST00000410055 2990 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC17.61■□□□□ 0.41
ITGA8P53708 AL645929.1-201ENST00000420084 975 ntBASIC17.61■□□□□ 0.41
ITGA8P53708 TSPY22P-201ENST00000427496 604 ntBASIC17.61■□□□□ 0.41
ITGA8P53708 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
ITGA8P53708 MEG3-211ENST00000452514 461 ntTSL 3 BASIC17.61■□□□□ 0.41
ITGA8P53708 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC17.61■□□□□ 0.41
ITGA8P53708 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC17.61■□□□□ 0.41
ITGA8P53708 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC17.61■□□□□ 0.41
ITGA8P53708 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC17.61■□□□□ 0.41
ITGA8P53708 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC17.61■□□□□ 0.41
ITGA8P53708 CLN6-204ENST00000564752 900 ntTSL 3 BASIC17.61■□□□□ 0.41
ITGA8P53708 CLN6-214ENST00000636314 442 ntTSL 3 BASIC17.61■□□□□ 0.41
ITGA8P53708 RDH10-201ENST00000240285 3949 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 ANKRD24-202ENST00000318934 3906 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
ITGA8P53708 AL353608.3-201ENST00000603200 2211 ntTSL 5 BASIC17.61■□□□□ 0.41
ITGA8P53708 F3-201ENST00000334047 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 PCNP-201ENST00000265260 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC17.61■□□□□ 0.41
ITGA8P53708 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 C2orf81-206ENST00000640868 2407 ntAPPRIS ALT2 BASIC17.61■□□□□ 0.41
ITGA8P53708 AL512625.1-201ENST00000305709 2541 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 PDAP1-201ENST00000350498 2546 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 GTDC1-219ENST00000542155 2677 ntAPPRIS P1 TSL 2 BASIC17.61■□□□□ 0.41
ITGA8P53708 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC17.61■□□□□ 0.41
ITGA8P53708 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
ITGA8P53708 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 ELFN2-208ENST00000430883 1970 ntTSL 2 BASIC17.6■□□□□ 0.41
ITGA8P53708 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 DIRC2-201ENST00000261038 3596 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 CTPS2-201ENST00000359276 3629 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC17.6■□□□□ 0.41
ITGA8P53708 VIPR2-201ENST00000262178 3944 ntAPPRIS P2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 PLEKHB1-202ENST00000354190 2380 ntAPPRIS P4 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 AC092364.2-201ENST00000596710 2692 ntBASIC17.6■□□□□ 0.41
ITGA8P53708 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 JRK-211ENST00000615982 2823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 ZNF707-223ENST00000532205 2865 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
ITGA8P53708 GPD2-201ENST00000310454 6041 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC17.6■□□□□ 0.41
ITGA8P53708 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ITGA8P53708 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.6■□□□□ 0.41
ITGA8P53708 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC17.6■□□□□ 0.41
ITGA8P53708 AC134772.1-201ENST00000438872 885 ntTSL 3 BASIC17.6■□□□□ 0.41
ITGA8P53708 AC068134.1-202ENST00000439072 356 ntTSL 5 BASIC17.6■□□□□ 0.41
ITGA8P53708 AC136604.3-201ENST00000508188 429 ntTSL 3 BASIC17.6■□□□□ 0.41
ITGA8P53708 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.6■□□□□ 0.41
ITGA8P53708 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC17.6■□□□□ 0.41
ITGA8P53708 CDKN3-209ENST00000556102 938 ntTSL 5 BASIC17.6■□□□□ 0.41
ITGA8P53708 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.6■□□□□ 0.41
ITGA8P53708 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC17.6■□□□□ 0.41
ITGA8P53708 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC17.6■□□□□ 0.41
ITGA8P53708 LCE1E-203ENST00000619588 267 ntAPPRIS ALT2 TSL 5 BASIC17.6■□□□□ 0.41
ITGA8P53708 VPS72-207ENST00000640458 689 ntTSL 5 BASIC17.6■□□□□ 0.41
ITGA8P53708 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 NFIX-209ENST00000587760 1487 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 SEPT6-209ENST00000489216 1617 ntAPPRIS ALT1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.6■□□□□ 0.41
ITGA8P53708 TSC2-204ENST00000401874 5421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
ITGA8P53708 COPS7B-206ENST00000410017 2051 ntTSL 3 BASIC17.6■□□□□ 0.41
ITGA8P53708 AL645728.1-201ENST00000366221 2101 ntBASIC17.6■□□□□ 0.41
ITGA8P53708 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC17.6■□□□□ 0.41
ITGA8P53708 AL162727.3-201ENST00000635661 2787 ntBASIC17.6■□□□□ 0.41
ITGA8P53708 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 FAM76B-201ENST00000358780 3952 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 RASAL3-201ENST00000343625 3293 ntAPPRIS P2 TSL 2 BASIC17.59■□□□□ 0.41
ITGA8P53708 ANKRD35-202ENST00000544626 3093 ntTSL 5 BASIC17.59■□□□□ 0.41
ITGA8P53708 AIFM3-202ENST00000399167 2387 ntAPPRIS P3 TSL 2 BASIC17.59■□□□□ 0.41
ITGA8P53708 AIFM3-207ENST00000440238 2368 ntAPPRIS P3 TSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 ASH1L-207ENST00000548830 1862 ntTSL 5 BASIC17.59■□□□□ 0.41
ITGA8P53708 TMEM39B-201ENST00000336294 1813 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 C16orf89-203ENST00000474471 1829 ntAPPRIS ALT2 TSL 5 BASIC17.59■□□□□ 0.41
ITGA8P53708 AC132938.5-201ENST00000624980 1813 ntBASIC17.59■□□□□ 0.41
ITGA8P53708 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC17.59■□□□□ 0.41
ITGA8P53708 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 HPCAL1-206ENST00000613496 1547 ntAPPRIS P1 TSL 3 BASIC17.59■□□□□ 0.41
ITGA8P53708 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 C20orf196-201ENST00000303142 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.59■□□□□ 0.41
ITGA8P53708 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC17.59■□□□□ 0.41
ITGA8P53708 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC17.59■□□□□ 0.41
ITGA8P53708 ENDOV-205ENST00000518644 625 ntTSL 4 BASIC17.59■□□□□ 0.41
ITGA8P53708 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC17.59■□□□□ 0.41
ITGA8P53708 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC17.59■□□□□ 0.41
ITGA8P53708 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC17.59■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms