Protein–RNA interactions for Protein: P43234

CTSO, Cathepsin O, humanhuman

Predicted RBP Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTSOP43234 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTSOP43234 EPHX2-204ENST00000518379 1959 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
CTSOP43234 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
CTSOP43234 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC17.33■□□□□ 0.36
CTSOP43234 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
CTSOP43234 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 TAPBP-238ENST00000475304 1686 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTSOP43234 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
CTSOP43234 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 DPM2-201ENST00000314392 1542 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
CTSOP43234 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC17.32■□□□□ 0.36
CTSOP43234 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
CTSOP43234 C19orf70-201ENST00000309324 896 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 GRHPR-201ENST00000318158 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 KCNIP2-208ENST00000370046 923 ntTSL 5 BASIC17.32■□□□□ 0.36
CTSOP43234 HMGN4-201ENST00000377575 1225 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 AC004967.1-201ENST00000453589 447 ntBASIC17.32■□□□□ 0.36
CTSOP43234 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC17.32■□□□□ 0.36
CTSOP43234 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC17.32■□□□□ 0.36
CTSOP43234 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC17.32■□□□□ 0.36
CTSOP43234 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
CTSOP43234 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTSOP43234 AC026471.1-201ENST00000564629 3026 ntBASIC17.31■□□□□ 0.36
CTSOP43234 TEX19-201ENST00000333437 1936 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSOP43234 PPIC-201ENST00000306442 1380 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSOP43234 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.31■□□□□ 0.36
CTSOP43234 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC17.31■□□□□ 0.36
CTSOP43234 AC005332.8-201ENST00000622750 2735 ntBASIC17.31■□□□□ 0.36
CTSOP43234 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC17.31■□□□□ 0.36
CTSOP43234 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSOP43234 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
CTSOP43234 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTSOP43234 EEF1E1-205ENST00000507463 654 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSOP43234 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSOP43234 TMIGD2-203ENST00000600114 489 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSOP43234 PGPEP1-209ENST00000604499 769 ntTSL 5 BASIC17.31■□□□□ 0.36
CTSOP43234 MED16-214ENST00000617672 554 ntTSL 5 BASIC17.31■□□□□ 0.36
CTSOP43234 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
CTSOP43234 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC17.31■□□□□ 0.36
CTSOP43234 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSOP43234 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSOP43234 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSOP43234 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSOP43234 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSOP43234 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
CTSOP43234 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC17.31■□□□□ 0.36
CTSOP43234 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC17.31■□□□□ 0.36
CTSOP43234 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC17.3■□□□□ 0.36
CTSOP43234 COQ6-201ENST00000334571 2118 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTSOP43234 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 C2orf27A-205ENST00000624391 1335 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTSOP43234 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSOP43234 FIGLA-201ENST00000332372 722 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 ASTL-201ENST00000342380 1296 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 AC211486.1-202ENST00000416371 468 ntBASIC17.3■□□□□ 0.36
CTSOP43234 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSOP43234 AC211476.1-201ENST00000503899 468 ntBASIC17.3■□□□□ 0.36
CTSOP43234 YBX1P5-201ENST00000509441 847 ntBASIC17.3■□□□□ 0.36
CTSOP43234 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.3■□□□□ 0.36
CTSOP43234 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSOP43234 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 AC040963.1-202ENST00000589729 644 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSOP43234 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
CTSOP43234 FRMD8P1-201ENST00000440433 1524 ntBASIC17.3■□□□□ 0.36
CTSOP43234 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSOP43234 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.3■□□□□ 0.36
CTSOP43234 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSOP43234 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 ATAD3A-207ENST00000536055 2332 ntTSL 2 BASIC17.3■□□□□ 0.36
CTSOP43234 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSOP43234 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC17.3■□□□□ 0.36
CTSOP43234 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
CTSOP43234 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSOP43234 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSOP43234 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSOP43234 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
CTSOP43234 HSPA8-224ENST00000534624 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
CTSOP43234 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 51.6 ms