Protein–RNA interactions for Protein: P26374

CHML, Rab proteins geranylgeranyltransferase component A 2, humanhuman

Predictions only

Length 656 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMLP26374 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMLP26374 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC20.63■□□□□ 0.89
CHMLP26374 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMLP26374 BMF-207ENST00000559701 630 ntTSL 3 BASIC20.63■□□□□ 0.89
CHMLP26374 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
CHMLP26374 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC20.63■□□□□ 0.89
CHMLP26374 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC20.63■□□□□ 0.89
CHMLP26374 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMLP26374 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMLP26374 ETV3L-201ENST00000454449 1976 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
CHMLP26374 DARS-201ENST00000264161 2361 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMLP26374 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC20.63■□□□□ 0.89
CHMLP26374 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
CHMLP26374 SMTNL2-201ENST00000338859 1919 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
CHMLP26374 FOS-208ENST00000555686 1496 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMLP26374 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC20.62■□□□□ 0.89
CHMLP26374 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC20.62■□□□□ 0.89
CHMLP26374 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMLP26374 TBC1D30-203ENST00000539867 2594 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 FOXRED2-203ENST00000397223 2184 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 TMEM155-202ENST00000394394 1753 ntAPPRIS P2 TSL 3 BASIC20.62■□□□□ 0.89
CHMLP26374 ZIC1-201ENST00000282928 5241 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CHMLP26374 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CHMLP26374 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC20.62■□□□□ 0.89
CHMLP26374 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 KCTD14-201ENST00000353172 1691 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 EIF6-202ENST00000374443 1017 ntTSL 5 BASIC20.62■□□□□ 0.89
CHMLP26374 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC20.62■□□□□ 0.89
CHMLP26374 SCARNA2-201ENST00000458748 420 ntBASIC20.62■□□□□ 0.89
CHMLP26374 LINC01711-201ENST00000598340 967 ntBASIC20.62■□□□□ 0.89
CHMLP26374 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 ULK3-201ENST00000440863 2623 ntAPPRIS P3 TSL 2 BASIC20.62■□□□□ 0.89
CHMLP26374 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
CHMLP26374 TMEM138-201ENST00000278826 1848 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
CHMLP26374 GPS1-226ENST00000623691 1839 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
CHMLP26374 MYB-205ENST00000367814 3302 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMLP26374 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
CHMLP26374 UBALD1-205ENST00000590891 2641 ntBASIC20.61■□□□□ 0.89
CHMLP26374 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMLP26374 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMLP26374 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMLP26374 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMLP26374 AC006504.4-201ENST00000592118 1568 ntBASIC20.61■□□□□ 0.89
CHMLP26374 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMLP26374 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMLP26374 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMLP26374 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.61■□□□□ 0.89
CHMLP26374 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMLP26374 ELOB-202ENST00000409477 997 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMLP26374 STEAP3-204ENST00000409811 2103 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
CHMLP26374 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC20.61■□□□□ 0.89
CHMLP26374 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMLP26374 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMLP26374 PAWRP1-201ENST00000451083 565 ntBASIC20.61■□□□□ 0.89
CHMLP26374 ARTN-206ENST00000472435 402 ntTSL 3 BASIC20.61■□□□□ 0.89
CHMLP26374 MSRA-206ENST00000521209 814 ntTSL 3 BASIC20.61■□□□□ 0.89
CHMLP26374 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMLP26374 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMLP26374 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC20.61■□□□□ 0.89
CHMLP26374 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC20.61■□□□□ 0.89
CHMLP26374 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMLP26374 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
CHMLP26374 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CHMLP26374 PKLR-201ENST00000342741 2083 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMLP26374 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMLP26374 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC20.6■□□□□ 0.89
CHMLP26374 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMLP26374 DNAH14-206ENST00000400952 1984 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMLP26374 TMUB2-204ENST00000538716 1953 ntAPPRIS ALT1 TSL 2 BASIC20.6■□□□□ 0.89
CHMLP26374 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC20.6■□□□□ 0.89
CHMLP26374 PTCHD3P3-201ENST00000403073 906 ntBASIC20.6■□□□□ 0.89
CHMLP26374 EMBP1-201ENST00000458200 901 ntBASIC20.6■□□□□ 0.89
CHMLP26374 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMLP26374 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMLP26374 PNMT-203ENST00000581428 677 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMLP26374 MCRIP2-211ENST00000629534 341 ntTSL 2 BASIC20.6■□□□□ 0.89
CHMLP26374 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC20.6■□□□□ 0.89
CHMLP26374 AL603756.1-201ENST00000606511 2163 ntBASIC20.6■□□□□ 0.89
CHMLP26374 PTGES3-201ENST00000262033 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMLP26374 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMLP26374 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMLP26374 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
CHMLP26374 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMLP26374 IRF1-202ENST00000405885 2061 ntAPPRIS P1 TSL 5 BASIC20.6■□□□□ 0.89
CHMLP26374 NUP50-203ENST00000407019 2059 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
CHMLP26374 SENP1-204ENST00000549518 2260 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
CHMLP26374 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC20.6■□□□□ 0.89
CHMLP26374 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 RTN1-201ENST00000267484 3435 ntAPPRIS P4 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 PDCL3-201ENST00000264254 1337 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
CHMLP26374 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC20.59■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms