Protein–RNA interactions for Protein: P17677

GAP43, Neuromodulin, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GAP43P17677 PSMC5-202ENST00000375812 1494 ntTSL 2 BASIC18.88■□□□□ 0.61
GAP43P17677 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC18.88■□□□□ 0.61
GAP43P17677 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC18.88■□□□□ 0.61
GAP43P17677 MAGI3-201ENST00000307546 6430 ntTSL 5 BASIC18.88■□□□□ 0.61
GAP43P17677 JPT1-209ENST00000482348 1614 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GAP43P17677 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
GAP43P17677 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GAP43P17677 DUSP4-201ENST00000240100 5537 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GAP43P17677 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
GAP43P17677 RDH13-223ENST00000610356 1931 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GAP43P17677 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.88■□□□□ 0.61
GAP43P17677 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
GAP43P17677 CDCP1-201ENST00000296129 6006 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
GAP43P17677 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC18.87■□□□□ 0.61
GAP43P17677 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GAP43P17677 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GAP43P17677 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GAP43P17677 SMIM29-201ENST00000335352 1160 ntTSL 2 BASIC18.87■□□□□ 0.61
GAP43P17677 C6orf132-201ENST00000341865 6210 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
GAP43P17677 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
GAP43P17677 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC18.87■□□□□ 0.61
GAP43P17677 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GAP43P17677 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC18.87■□□□□ 0.61
GAP43P17677 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GAP43P17677 AL162171.1-201ENST00000556328 718 ntTSL 3 BASIC18.87■□□□□ 0.61
GAP43P17677 AC012640.2-201ENST00000561606 901 ntBASIC18.87■□□□□ 0.61
GAP43P17677 YPEL3-209ENST00000566595 796 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
GAP43P17677 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GAP43P17677 PI4KAP1-204ENST00000612579 1703 ntBASIC18.87■□□□□ 0.61
GAP43P17677 SCOC-211ENST00000614192 1959 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
GAP43P17677 ADORA1-209ENST00000640524 653 ntTSL 5 BASIC18.87■□□□□ 0.61
GAP43P17677 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GAP43P17677 CSRNP1-201ENST00000273153 3148 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
GAP43P17677 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC18.87■□□□□ 0.61
GAP43P17677 AC022211.2-201ENST00000585075 2527 ntBASIC18.87■□□□□ 0.61
GAP43P17677 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
GAP43P17677 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 CFL1-203ENST00000525451 1878 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
GAP43P17677 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 FOS-208ENST00000555686 1496 ntTSL 2 BASIC18.86■□□□□ 0.61
GAP43P17677 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC18.86■□□□□ 0.61
GAP43P17677 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 TMEM59-202ENST00000371337 600 ntTSL 2 BASIC18.86■□□□□ 0.61
GAP43P17677 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.86■□□□□ 0.61
GAP43P17677 MRPL3P1-201ENST00000400109 1033 ntBASIC18.86■□□□□ 0.61
GAP43P17677 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 AP000688.4-201ENST00000436303 446 ntTSL 3 BASIC18.86■□□□□ 0.61
GAP43P17677 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC18.86■□□□□ 0.61
GAP43P17677 PRKN-208ENST00000610470 531 ntTSL 2 BASIC18.86■□□□□ 0.61
GAP43P17677 PRKN-209ENST00000612485 225 ntTSL 5 BASIC18.86■□□□□ 0.61
GAP43P17677 GGTLC5P-201ENST00000617623 998 ntBASIC18.86■□□□□ 0.61
GAP43P17677 TMEM178A-206ENST00000618232 1286 ntTSL 5 BASIC18.86■□□□□ 0.61
GAP43P17677 OPN5-206ENST00000638973 1090 ntTSL 5 BASIC18.86■□□□□ 0.61
GAP43P17677 KLC1-202ENST00000334553 2524 ntTSL 5 BASIC18.86■□□□□ 0.61
GAP43P17677 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 AD000864.1-201ENST00000624076 2295 ntBASIC18.86■□□□□ 0.61
GAP43P17677 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC18.86■□□□□ 0.61
GAP43P17677 PTPRO-209ENST00000543886 2070 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
GAP43P17677 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 AP002414.3-201ENST00000589352 1468 ntBASIC18.85■□□□□ 0.61
GAP43P17677 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC18.85■□□□□ 0.61
GAP43P17677 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
GAP43P17677 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 TSTD1-204ENST00000423014 593 ntAPPRIS ALT2 TSL 2 BASIC18.85■□□□□ 0.61
GAP43P17677 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC18.85■□□□□ 0.61
GAP43P17677 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC18.85■□□□□ 0.61
GAP43P17677 SLC25A6P4-201ENST00000586535 553 ntBASIC18.85■□□□□ 0.61
GAP43P17677 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.85■□□□□ 0.61
GAP43P17677 AC008667.4-201ENST00000607370 168 ntBASIC18.85■□□□□ 0.61
GAP43P17677 ABBA01031661.1-201ENST00000634362 1253 ntBASIC18.85■□□□□ 0.61
GAP43P17677 POC1A-201ENST00000296484 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC18.85■□□□□ 0.61
GAP43P17677 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC18.85■□□□□ 0.61
GAP43P17677 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC18.85■□□□□ 0.61
GAP43P17677 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
GAP43P17677 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC18.85■□□□□ 0.61
GAP43P17677 TMPRSS2-206ENST00000458356 1701 ntAPPRIS P1 TSL 2 BASIC18.85■□□□□ 0.61
GAP43P17677 SLC7A2-205ENST00000522656 2274 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 AC105020.1-201ENST00000435356 2205 ntBASIC18.85■□□□□ 0.61
GAP43P17677 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
GAP43P17677 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 28.3 ms