Protein–RNA interactions for Protein: P04437

TCRA, T-cell receptor alpha chain V region CTL-L17, humanhuman

Predictions only

Length 139 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRAP04437 LRRFIP1-201ENST00000244815 4370 ntAPPRIS P3 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 JADE2-202ENST00000361895 3212 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC13.08□□□□□ -0.32
TCRAP04437 BRIX1-201ENST00000336767 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 GBA2-202ENST00000378094 3757 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC13.08□□□□□ -0.32
TCRAP04437 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.08□□□□□ -0.32
TCRAP04437 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 ROMO1-202ENST00000374072 350 ntTSL 5 BASIC13.08□□□□□ -0.32
TCRAP04437 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 CRAT-202ENST00000393384 973 ntTSL 2 BASIC13.08□□□□□ -0.32
TCRAP04437 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC13.08□□□□□ -0.32
TCRAP04437 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC13.08□□□□□ -0.32
TCRAP04437 ATP6V0E2-AS1-201ENST00000461019 2973 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 TVP23B-202ENST00000476139 2989 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 AP002490.2-201ENST00000524791 560 ntBASIC13.08□□□□□ -0.32
TCRAP04437 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC13.08□□□□□ -0.32
TCRAP04437 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC13.08□□□□□ -0.32
TCRAP04437 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC13.08□□□□□ -0.32
TCRAP04437 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC13.08□□□□□ -0.32
TCRAP04437 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 AKT1-214ENST00000555528 3066 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 AC010478.1-202ENST00000559112 2367 ntTSL 2 BASIC13.08□□□□□ -0.32
TCRAP04437 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 NR4A3-204ENST00000618101 5706 ntAPPRIS P4 TSL 5 BASIC13.08□□□□□ -0.32
TCRAP04437 PLXNC1-201ENST00000258526 7346 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 AFAP1L2-202ENST00000369271 3964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 FAM83G-201ENST00000345041 2929 ntAPPRIS P1 TSL 5 BASIC13.08□□□□□ -0.32
TCRAP04437 SGO1-203ENST00000412997 2587 ntAPPRIS P4 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 SLC5A6-203ENST00000408041 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 HLA-A-202ENST00000376806 1854 ntBASIC13.08□□□□□ -0.32
TCRAP04437 TPCN1-201ENST00000335509 5274 ntAPPRIS P1 TSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 NKPD1-201ENST00000317951 4233 ntAPPRIS P1 TSL 2 BASIC13.08□□□□□ -0.32
TCRAP04437 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 UBQLN1-201ENST00000257468 2299 ntTSL 1 (best) BASIC13.08□□□□□ -0.32
TCRAP04437 PTPN20-203ENST00000374342 1929 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 ST8SIA4-202ENST00000451528 1794 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 TTC24-202ENST00000368237 1969 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TCRAP04437 LCK-201ENST00000333070 2166 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 NUCB1-202ENST00000407032 2158 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
TCRAP04437 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
TCRAP04437 ELN-221ENST00000445912 2583 ntAPPRIS ALT2 TSL 2 BASIC13.07□□□□□ -0.32
TCRAP04437 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC13.07□□□□□ -0.32
TCRAP04437 CACFD1-202ENST00000316948 2794 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 ADARB2-203ENST00000381312 8421 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 SLC43A3-203ENST00000395124 2617 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC13.07□□□□□ -0.32
TCRAP04437 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 SYNGR1-201ENST00000216155 497 ntTSL 3 BASIC13.07□□□□□ -0.32
TCRAP04437 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC13.07□□□□□ -0.32
TCRAP04437 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC13.07□□□□□ -0.32
TCRAP04437 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC13.07□□□□□ -0.32
TCRAP04437 FAM8A6P-201ENST00000407496 1135 ntBASIC13.07□□□□□ -0.32
TCRAP04437 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC13.07□□□□□ -0.32
TCRAP04437 HLA-F-220ENST00000434407 884 ntBASIC13.07□□□□□ -0.32
TCRAP04437 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 ZNF655-218ENST00000454654 571 ntTSL 4 BASIC13.07□□□□□ -0.32
TCRAP04437 AP003733.1-201ENST00000491725 852 ntBASIC13.07□□□□□ -0.32
TCRAP04437 NDUFV2-207ENST00000497577 868 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRAP04437 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC13.07□□□□□ -0.32
TCRAP04437 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 AC008550.1-201ENST00000511500 884 ntBASIC13.07□□□□□ -0.32
TCRAP04437 AC089999.2-201ENST00000552525 248 ntTSL 3 BASIC13.07□□□□□ -0.32
TCRAP04437 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC13.07□□□□□ -0.32
TCRAP04437 DCTPP1-205ENST00000568973 878 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRAP04437 NAA38-203ENST00000575071 553 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRAP04437 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC13.07□□□□□ -0.32
TCRAP04437 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC13.07□□□□□ -0.32
TCRAP04437 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 WT1-203ENST00000379079 2466 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 AC006019.1-201ENST00000425591 2470 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRAP04437 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRAP04437 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 IQSEC3-203ENST00000538872 7094 ntAPPRIS ALT2 TSL 5 BASIC13.07□□□□□ -0.32
TCRAP04437 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
TCRAP04437 RGS3-210ENST00000462143 2759 ntTSL 2 BASIC13.07□□□□□ -0.32
TCRAP04437 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Retrieved 100 of 98,524 protein–RNA pairs in 48.9 ms