Protein–RNA interactions for Protein: P04085

PDGFA, Platelet-derived growth factor subunit A, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFAP04085 MINK1-202ENST00000355280 4961 ntAPPRIS P4 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 PARD3-206ENST00000374776 3389 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC16.05■□□□□ 0.16
PDGFAP04085 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDGFAP04085 IRF8-203ENST00000563180 1394 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 PRR5-203ENST00000403581 2279 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFAP04085 BCAR1-209ENST00000546196 1340 ntBASIC16.05■□□□□ 0.16
PDGFAP04085 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDGFAP04085 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 SPACA4-201ENST00000321762 972 ntAPPRIS P1 BASIC16.05■□□□□ 0.16
PDGFAP04085 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 MIR770-201ENST00000390219 98 ntBASIC16.05■□□□□ 0.16
PDGFAP04085 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC16.05■□□□□ 0.16
PDGFAP04085 WDR53-203ENST00000429115 683 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFAP04085 SIGLEC30P-201ENST00000455569 941 ntBASIC16.05■□□□□ 0.16
PDGFAP04085 AKR1A1-204ENST00000471651 1018 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 RIMS4-202ENST00000541604 1036 ntAPPRIS ALT1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 KRT19P2-202ENST00000557173 1012 ntBASIC16.05■□□□□ 0.16
PDGFAP04085 AL110118.2-203ENST00000557574 554 ntAPPRIS P1 TSL 4 BASIC16.05■□□□□ 0.16
PDGFAP04085 SPAG7-207ENST00000575142 1094 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 OR7E47P-204ENST00000575924 449 ntBASIC16.05■□□□□ 0.16
PDGFAP04085 AC092364.2-202ENST00000597012 1073 ntBASIC16.05■□□□□ 0.16
PDGFAP04085 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 AC010654.1-201ENST00000615722 808 ntBASIC16.05■□□□□ 0.16
PDGFAP04085 GDF6-201ENST00000287020 3701 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 AC018755.2-202ENST00000429354 1926 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC16.05■□□□□ 0.16
PDGFAP04085 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC16.05■□□□□ 0.16
PDGFAP04085 AC080080.1-201ENST00000625121 2420 ntBASIC16.05■□□□□ 0.16
PDGFAP04085 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC16.05■□□□□ 0.16
PDGFAP04085 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFAP04085 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.05■□□□□ 0.16
PDGFAP04085 TNFRSF14-AS1-205ENST00000449660 1629 ntTSL 2 BASIC16.05■□□□□ 0.16
PDGFAP04085 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFAP04085 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 C12orf42-201ENST00000378113 1513 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PDGFAP04085 RBFOX1-207ENST00000547338 1513 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFAP04085 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PDGFAP04085 APBB1-215ENST00000608394 2128 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFAP04085 APBB1-222ENST00000610474 2147 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFAP04085 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.04■□□□□ 0.16
PDGFAP04085 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDGFAP04085 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFAP04085 PARD3B-206ENST00000462231 2968 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 PNRC1-202ENST00000354922 1345 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 TRAPPC1-201ENST00000303731 811 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 AC003669.1-201ENST00000334569 611 ntBASIC16.04■□□□□ 0.16
PDGFAP04085 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 AL139400.1-201ENST00000366220 510 ntBASIC16.04■□□□□ 0.16
PDGFAP04085 ITM2B-201ENST00000378549 805 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFAP04085 PTCHD3P3-201ENST00000403073 906 ntBASIC16.04■□□□□ 0.16
PDGFAP04085 SYS1-203ENST00000414310 795 ntTSL 3 BASIC16.04■□□□□ 0.16
PDGFAP04085 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDGFAP04085 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.04■□□□□ 0.16
PDGFAP04085 PXN-AS1-201ENST00000535200 1170 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFAP04085 RNASEK-207ENST00000552842 595 ntTSL 3 BASIC16.04■□□□□ 0.16
PDGFAP04085 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFAP04085 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFAP04085 AC009630.3-201ENST00000581909 729 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFAP04085 PTPRS-208ENST00000590509 893 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 TMED1-207ENST00000591695 809 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFAP04085 AL590235.2-202ENST00000602543 594 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFAP04085 AQP6-205ENST00000618286 829 ntTSL 5 BASIC16.04■□□□□ 0.16
PDGFAP04085 AL805961.1-202ENST00000641562 540 ntBASIC16.04■□□□□ 0.16
PDGFAP04085 MAP3K6-202ENST00000374040 4309 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 SLC39A13-202ENST00000362021 2296 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 OR6D1P-202ENST00000641007 5290 ntBASIC16.04■□□□□ 0.16
PDGFAP04085 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 VRK3-225ENST00000601912 1668 ntAPPRIS ALT2 TSL 5 BASIC16.04■□□□□ 0.16
PDGFAP04085 DKK3-201ENST00000326932 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 NSDHL-203ENST00000440023 1630 ntAPPRIS P2 TSL 5 BASIC16.04■□□□□ 0.16
PDGFAP04085 TBC1D1-203ENST00000402522 1567 ntTSL 2 BASIC16.04■□□□□ 0.16
PDGFAP04085 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC16.04■□□□□ 0.16
PDGFAP04085 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC16.04■□□□□ 0.16
PDGFAP04085 SLC12A9-202ENST00000415287 1912 ntTSL 1 (best) BASIC16.04■□□□□ 0.16
PDGFAP04085 CLPTM1-203ENST00000546079 2342 ntTSL 2 BASIC16.03■□□□□ 0.16
PDGFAP04085 PC-214ENST00000628663 1470 ntTSL 5 BASIC16.03■□□□□ 0.16
PDGFAP04085 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFAP04085 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFAP04085 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PDGFAP04085 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
PDGFAP04085 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.03■□□□□ 0.16
PDGFAP04085 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFAP04085 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.03■□□□□ 0.16
PDGFAP04085 PIGF-201ENST00000281382 1372 ntAPPRIS P1 TSL 1 (best) BASIC16.03■□□□□ 0.16
PDGFAP04085 AC008687.8-201ENST00000599795 1748 ntAPPRIS P1 TSL 2 BASIC16.03■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 38.3 ms