Protein–RNA interactions for Protein: P00374

DHFR, Dihydrofolate reductase, humanhuman

Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DHFRP00374 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DHFRP00374 EIF4G1-216ENST00000427845 5038 ntTSL 5 BASIC14.9□□□□□ -0.02
DHFRP00374 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC14.9□□□□□ -0.02
DHFRP00374 CDSN-202ENST00000376288 2552 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DHFRP00374 B3GNT8-201ENST00000321702 1874 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DHFRP00374 CLIC6-202ENST00000360731 3860 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
DHFRP00374 CASC3-201ENST00000264645 4116 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DHFRP00374 KRT8P9-201ENST00000558927 1449 ntBASIC14.9□□□□□ -0.02
DHFRP00374 LINC02228-204ENST00000642115 2962 ntBASIC14.9□□□□□ -0.02
DHFRP00374 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC14.9□□□□□ -0.02
DHFRP00374 GPR153-201ENST00000377893 4082 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DHFRP00374 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC14.9□□□□□ -0.02
DHFRP00374 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC14.9□□□□□ -0.02
DHFRP00374 ZNF367-201ENST00000375256 3646 ntAPPRIS P1 TSL 1 (best) BASIC14.9□□□□□ -0.02
DHFRP00374 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC14.9□□□□□ -0.02
DHFRP00374 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 DKC1-213ENST00000620277 3079 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 AC099684.1-202ENST00000425277 1747 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC14.89□□□□□ -0.03
DHFRP00374 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC14.89□□□□□ -0.03
DHFRP00374 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 GLUD2-201ENST00000328078 2493 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
DHFRP00374 VILL-207ENST00000465644 1857 ntTSL 5 BASIC14.89□□□□□ -0.03
DHFRP00374 SLC43A1-204ENST00000528450 2358 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC14.89□□□□□ -0.03
DHFRP00374 FOXN1-203ENST00000579795 2145 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 SLC46A2-201ENST00000374228 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 AC097376.2-201ENST00000608661 2510 ntTSL 5 BASIC14.89□□□□□ -0.03
DHFRP00374 ZMYM3-202ENST00000373978 1511 ntTSL 5 BASIC14.89□□□□□ -0.03
DHFRP00374 IER2-203ENST00000588173 2934 ntAPPRIS P1 BASIC14.89□□□□□ -0.03
DHFRP00374 MBD1-222ENST00000590208 2913 ntAPPRIS ALT2 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 BAALC-201ENST00000297574 801 ntTSL 3 BASIC14.89□□□□□ -0.03
DHFRP00374 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC14.89□□□□□ -0.03
DHFRP00374 DDX43P3-201ENST00000441064 443 ntBASIC14.89□□□□□ -0.03
DHFRP00374 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC14.89□□□□□ -0.03
DHFRP00374 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC14.89□□□□□ -0.03
DHFRP00374 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC14.89□□□□□ -0.03
DHFRP00374 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC14.89□□□□□ -0.03
DHFRP00374 SLC2A13-202ENST00000380858 3082 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 SEMA3G-201ENST00000231721 4899 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 WIPF3-202ENST00000409123 3491 ntAPPRIS ALT2 TSL 5 BASIC14.89□□□□□ -0.03
DHFRP00374 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
DHFRP00374 DUSP18-201ENST00000334679 2479 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 CFAP77-201ENST00000343036 1818 ntAPPRIS P3 TSL 2 BASIC14.89□□□□□ -0.03
DHFRP00374 AC009949.1-201ENST00000623048 1830 ntBASIC14.89□□□□□ -0.03
DHFRP00374 SYT1-201ENST00000261205 4808 ntAPPRIS P3 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 SBF1P1-201ENST00000444527 5631 ntBASIC14.89□□□□□ -0.03
DHFRP00374 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 MRPL3-201ENST00000264995 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 AL445931.1-201ENST00000412181 2112 ntTSL 2 BASIC14.89□□□□□ -0.03
DHFRP00374 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC14.89□□□□□ -0.03
DHFRP00374 RNASE4-203ENST00000555835 2520 ntAPPRIS P1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 PKM-216ENST00000565184 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC14.89□□□□□ -0.03
DHFRP00374 KLHDC8A-201ENST00000367155 2928 ntAPPRIS P1 TSL 2 BASIC14.89□□□□□ -0.03
DHFRP00374 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC14.89□□□□□ -0.03
DHFRP00374 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC14.88□□□□□ -0.03
DHFRP00374 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC14.88□□□□□ -0.03
DHFRP00374 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 KIAA1211-206ENST00000541073 4117 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 CNPPD1-202ENST00000409789 2073 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 RASGEF1C-206ENST00000522500 2055 ntTSL 2 BASIC14.88□□□□□ -0.03
DHFRP00374 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 CYP2S1-201ENST00000310054 2782 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 WBP2-215ENST00000591399 2225 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
DHFRP00374 AC132938.6-201ENST00000623828 1655 ntBASIC14.88□□□□□ -0.03
DHFRP00374 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 AC092364.2-201ENST00000596710 2692 ntBASIC14.88□□□□□ -0.03
DHFRP00374 Z99756.1-201ENST00000458463 1951 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 CAPN10-202ENST00000270364 1267 ntTSL 2 BASIC14.88□□□□□ -0.03
DHFRP00374 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC14.88□□□□□ -0.03
DHFRP00374 AC012618.2-201ENST00000428058 849 ntBASIC14.88□□□□□ -0.03
DHFRP00374 ADAM15-208ENST00000447332 2146 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
DHFRP00374 AC091390.4-202ENST00000476426 537 ntBASIC14.88□□□□□ -0.03
DHFRP00374 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC14.88□□□□□ -0.03
DHFRP00374 AC117500.4-201ENST00000542797 617 ntTSL 3 BASIC14.88□□□□□ -0.03
DHFRP00374 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 CD177P1-201ENST00000606252 935 ntBASIC14.88□□□□□ -0.03
DHFRP00374 MIR6786-201ENST00000616843 113 ntBASIC14.88□□□□□ -0.03
DHFRP00374 EBLN3P-205ENST00000629870 958 ntTSL 3 BASIC14.88□□□□□ -0.03
DHFRP00374 CHAT-203ENST00000351556 2286 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
DHFRP00374 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 TFPI2-201ENST00000222543 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 DDX5-201ENST00000225792 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 GPSM1-205ENST00000440944 3633 ntAPPRIS P2 TSL 5 BASIC14.88□□□□□ -0.03
DHFRP00374 RASA1-201ENST00000274376 3752 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 CUL7-203ENST00000535468 5504 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
DHFRP00374 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC14.88□□□□□ -0.03
DHFRP00374 MRGPRF-AS1-201ENST00000538407 1490 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms