Protein–RNA interactions for Protein: O95292

VAPB, Vesicle-associated membrane protein-associated protein B/C, humanhuman

Predictions only

Length 243 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VAPBO95292 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.24■□□□□ 0.35
VAPBO95292 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 SIGLEC8-202ENST00000340550 1293 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 NUS1P1-201ENST00000446295 882 ntBASIC17.24■□□□□ 0.35
VAPBO95292 AC132008.2-207ENST00000454517 770 ntBASIC17.24■□□□□ 0.35
VAPBO95292 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VAPBO95292 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.24■□□□□ 0.35
VAPBO95292 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC17.24■□□□□ 0.35
VAPBO95292 FRMD8P1-201ENST00000440433 1524 ntBASIC17.24■□□□□ 0.35
VAPBO95292 ZFYVE28-208ENST00000511071 3273 ntAPPRIS ALT2 TSL 5 BASIC17.24■□□□□ 0.35
VAPBO95292 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 LINC00094-205ENST00000603928 5722 ntAPPRIS ALT2 TSL 2 BASIC17.24■□□□□ 0.35
VAPBO95292 ZFP3-201ENST00000318833 5206 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 CHST8-201ENST00000262622 2479 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 PHKA1-205ENST00000541944 5944 ntAPPRIS ALT1 TSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 AC097637.2-201ENST00000624096 1997 ntBASIC17.24■□□□□ 0.35
VAPBO95292 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.24■□□□□ 0.35
VAPBO95292 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC17.24■□□□□ 0.35
VAPBO95292 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.23■□□□□ 0.35
VAPBO95292 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.23■□□□□ 0.35
VAPBO95292 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 AP005117.1-201ENST00000584346 1413 ntBASIC17.23■□□□□ 0.35
VAPBO95292 SIGLEC16-201ENST00000599858 1437 ntBASIC17.23■□□□□ 0.35
VAPBO95292 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 IL34-202ENST00000429149 1779 ntAPPRIS P2 TSL 5 BASIC17.23■□□□□ 0.35
VAPBO95292 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 AC004817.3-201ENST00000602957 2129 ntBASIC17.23■□□□□ 0.35
VAPBO95292 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.23■□□□□ 0.35
VAPBO95292 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC17.23■□□□□ 0.35
VAPBO95292 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC17.23■□□□□ 0.35
VAPBO95292 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC17.23■□□□□ 0.35
VAPBO95292 AC079776.2-201ENST00000641154 1609 ntBASIC17.23■□□□□ 0.35
VAPBO95292 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC17.23■□□□□ 0.35
VAPBO95292 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 TLE1-202ENST00000376484 666 ntTSL 3 BASIC17.23■□□□□ 0.35
VAPBO95292 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC17.23■□□□□ 0.35
VAPBO95292 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.23■□□□□ 0.35
VAPBO95292 IGHV3OR16-7-201ENST00000604106 360 ntBASIC17.23■□□□□ 0.35
VAPBO95292 AP001269.4-201ENST00000609611 512 ntBASIC17.23■□□□□ 0.35
VAPBO95292 PICALM-219ENST00000532317 3474 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 RNF216P1-203ENST00000404404 2427 ntBASIC17.23■□□□□ 0.35
VAPBO95292 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 PPOX-202ENST00000367999 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.23■□□□□ 0.35
VAPBO95292 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.23■□□□□ 0.35
VAPBO95292 SORT1-201ENST00000256637 7028 ntAPPRIS P1 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC17.23■□□□□ 0.35
VAPBO95292 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC17.22■□□□□ 0.35
VAPBO95292 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
VAPBO95292 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC17.22■□□□□ 0.35
VAPBO95292 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPBO95292 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VAPBO95292 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC17.22■□□□□ 0.35
VAPBO95292 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPBO95292 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC17.22■□□□□ 0.35
VAPBO95292 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPBO95292 HLA-DMA-201ENST00000374843 1123 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
VAPBO95292 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC17.22■□□□□ 0.35
VAPBO95292 ACTG1P4-201ENST00000425123 1122 ntBASIC17.22■□□□□ 0.35
VAPBO95292 AL645941.2-201ENST00000429234 612 ntAPPRIS P1 TSL 2 BASIC17.22■□□□□ 0.35
VAPBO95292 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC17.22■□□□□ 0.35
VAPBO95292 AK2-204ENST00000467905 880 ntAPPRIS ALT1 TSL 2 BASIC17.22■□□□□ 0.35
VAPBO95292 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC17.22■□□□□ 0.35
VAPBO95292 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPBO95292 AC073592.4-201ENST00000623827 446 ntBASIC17.22■□□□□ 0.35
VAPBO95292 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPBO95292 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.22■□□□□ 0.35
VAPBO95292 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPBO95292 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPBO95292 DUSP8-202ENST00000397374 4480 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPBO95292 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPBO95292 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
VAPBO95292 PGRMC2-207ENST00000520121 3785 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
VAPBO95292 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VAPBO95292 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC17.21■□□□□ 0.35
VAPBO95292 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VAPBO95292 CROCCP3-201ENST00000263511 5368 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
VAPBO95292 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VAPBO95292 ARHGAP11A-201ENST00000361627 5898 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
VAPBO95292 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC17.21■□□□□ 0.35
VAPBO95292 UBALD1-205ENST00000590891 2641 ntBASIC17.21■□□□□ 0.35
VAPBO95292 ZNF281-203ENST00000367353 3080 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VAPBO95292 CTNNAL1-201ENST00000325551 2490 ntAPPRIS P3 TSL 1 (best) BASIC17.21■□□□□ 0.35
VAPBO95292 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.21■□□□□ 0.35
VAPBO95292 MTA2-204ENST00000527204 2265 ntTSL 2 BASIC17.21■□□□□ 0.35
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms