Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 DBNDD2-202ENST00000360981 1078 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 MYCLP1-201ENST00000372451 1075 ntBASIC17.22■□□□□ 0.35
GPC4O75487 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC17.22■□□□□ 0.35
GPC4O75487 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.22■□□□□ 0.35
GPC4O75487 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GPC4O75487 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.22■□□□□ 0.35
GPC4O75487 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC17.22■□□□□ 0.35
GPC4O75487 AP000344.1-201ENST00000454268 641 ntTSL 5 BASIC17.22■□□□□ 0.35
GPC4O75487 AP000344.1-202ENST00000457193 586 ntTSL 4 BASIC17.22■□□□□ 0.35
GPC4O75487 IGHV3-52-201ENST00000519770 353 ntBASIC17.22■□□□□ 0.35
GPC4O75487 PML-221ENST00000569965 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC17.22■□□□□ 0.35
GPC4O75487 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.22■□□□□ 0.35
GPC4O75487 CLEC4GP1-201ENST00000596555 870 ntBASIC17.22■□□□□ 0.35
GPC4O75487 AL591684.3-201ENST00000605187 298 ntBASIC17.22■□□□□ 0.35
GPC4O75487 AXIN2-208ENST00000611991 1019 ntTSL 5 BASIC17.22■□□□□ 0.35
GPC4O75487 AL139327.4-201ENST00000612362 153 ntBASIC17.22■□□□□ 0.35
GPC4O75487 EZR-202ENST00000367075 3096 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 GNAQ-201ENST00000286548 6539 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 KRT28-201ENST00000306658 1685 ntAPPRIS P1 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 PURB-201ENST00000395699 9069 ntAPPRIS P1 BASIC17.22■□□□□ 0.35
GPC4O75487 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.22■□□□□ 0.35
GPC4O75487 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC17.22■□□□□ 0.35
GPC4O75487 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC17.21■□□□□ 0.35
GPC4O75487 HYAL3-202ENST00000359051 1635 ntTSL 5 BASIC17.21■□□□□ 0.35
GPC4O75487 ISYNA1-202ENST00000457269 1703 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC4O75487 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 C11orf80-203ENST00000525449 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 LYSMD4-203ENST00000378904 2122 ntBASIC17.21■□□□□ 0.35
GPC4O75487 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 RANBP9-201ENST00000011619 3113 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC4O75487 BCAM-206ENST00000589651 2686 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
GPC4O75487 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GPC4O75487 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 HES1-201ENST00000232424 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 SSBP3-203ENST00000371319 1578 ntAPPRIS ALT1 TSL 2 BASIC17.21■□□□□ 0.35
GPC4O75487 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 ST8SIA5-202ENST00000536490 1499 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC4O75487 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC17.21■□□□□ 0.35
GPC4O75487 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 B4GALT1-AS1-202ENST00000442432 843 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC4O75487 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC4O75487 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC17.21■□□□□ 0.35
GPC4O75487 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC17.21■□□□□ 0.35
GPC4O75487 AC111152.3-201ENST00000569699 673 ntBASIC17.21■□□□□ 0.35
GPC4O75487 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.21■□□□□ 0.35
GPC4O75487 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.21■□□□□ 0.35
GPC4O75487 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 AL121772.3-201ENST00000610840 674 ntBASIC17.21■□□□□ 0.35
GPC4O75487 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC17.21■□□□□ 0.35
GPC4O75487 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.21■□□□□ 0.35
GPC4O75487 AP000867.4-201ENST00000641616 219 ntBASIC17.21■□□□□ 0.35
GPC4O75487 OSGIN1-202ENST00000361711 2230 ntAPPRIS P1 TSL 2 BASIC17.21■□□□□ 0.35
GPC4O75487 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 FAM234A-202ENST00000301679 1936 ntTSL 2 BASIC17.21■□□□□ 0.35
GPC4O75487 STAT5A-207ENST00000546010 3086 ntTSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 BAP1-202ENST00000460680 3937 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.35
GPC4O75487 TMUB2-213ENST00000589856 1505 ntTSL 2 BASIC17.21■□□□□ 0.34
GPC4O75487 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.21■□□□□ 0.34
GPC4O75487 MSI2-201ENST00000284073 6364 ntAPPRIS P4 TSL 1 (best) BASIC17.21■□□□□ 0.34
GPC4O75487 TMEM25-225ENST00000533102 1410 ntTSL 1 (best) BASIC17.21■□□□□ 0.34
GPC4O75487 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 PTPRS-205ENST00000588012 5993 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 AIFM3-203ENST00000405089 2333 ntAPPRIS ALT1 TSL 2 BASIC17.2■□□□□ 0.34
GPC4O75487 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 PMPCAP1-201ENST00000508114 1576 ntBASIC17.2■□□□□ 0.34
GPC4O75487 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC17.2■□□□□ 0.34
GPC4O75487 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 SGPP1-201ENST00000247225 3312 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 S100A11-201ENST00000271638 594 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 FUOM-202ENST00000368551 628 ntTSL 3 BASIC17.2■□□□□ 0.34
GPC4O75487 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 HCCS-202ENST00000380762 1072 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 KRT18P31-201ENST00000506277 1292 ntBASIC17.2■□□□□ 0.34
GPC4O75487 AC106791.1-202ENST00000508281 1148 ntTSL 2 BASIC17.2■□□□□ 0.34
GPC4O75487 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC17.2■□□□□ 0.34
GPC4O75487 STK25P1-201ENST00000585406 838 ntBASIC17.2■□□□□ 0.34
GPC4O75487 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 VRK1-201ENST00000216639 1745 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 PTPN11-201ENST00000351677 6101 ntAPPRIS P3 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC17.2■□□□□ 0.34
GPC4O75487 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC17.2■□□□□ 0.34
GPC4O75487 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC17.2■□□□□ 0.34
Retrieved 100 of 98,524 protein–RNA pairs in 60.5 ms