Protein–RNA interactions for Protein: O75365

PTP4A3, Protein tyrosine phosphatase type IVA 3, humanhuman

Predictions only

Length 173 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3O75365 TNNT1-204ENST00000585321 995 ntAPPRIS ALT2 TSL 5 BASIC15.46■□□□□ 0.07
PTP4A3O75365 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC15.46■□□□□ 0.07
PTP4A3O75365 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A3O75365 SLC3A2-203ENST00000377890 2161 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A3O75365 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
PTP4A3O75365 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC15.46■□□□□ 0.07
PTP4A3O75365 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
PTP4A3O75365 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC15.46■□□□□ 0.06
PTP4A3O75365 AC226118.1-201ENST00000515213 2146 ntTSL 2 BASIC15.46■□□□□ 0.06
PTP4A3O75365 SMARCA4-215ENST00000590574 5282 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
PTP4A3O75365 TUBB8P12-201ENST00000308911 1335 ntBASIC15.45■□□□□ 0.06
PTP4A3O75365 TUBB7P-202ENST00000428444 1305 ntBASIC15.45■□□□□ 0.06
PTP4A3O75365 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 TUBB8P7-204ENST00000567960 1332 ntBASIC15.45■□□□□ 0.06
PTP4A3O75365 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 ZMYM3-203ENST00000373981 1841 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 TRIM7-201ENST00000274773 2840 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 SSH1-201ENST00000326470 2432 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTP4A3O75365 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC15.45■□□□□ 0.06
PTP4A3O75365 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC15.45■□□□□ 0.06
PTP4A3O75365 NKIRAS1-208ENST00000443659 2391 ntAPPRIS P2 TSL 5 BASIC15.45■□□□□ 0.06
PTP4A3O75365 SOD2-201ENST00000337404 991 ntTSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 FUOM-202ENST00000368551 628 ntTSL 3 BASIC15.45■□□□□ 0.06
PTP4A3O75365 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 SPDYE21P-201ENST00000413323 827 ntBASIC15.45■□□□□ 0.06
PTP4A3O75365 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC15.45■□□□□ 0.06
PTP4A3O75365 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC15.45■□□□□ 0.06
PTP4A3O75365 BET1L-206ENST00000486280 665 ntTSL 3 BASIC15.45■□□□□ 0.06
PTP4A3O75365 COX5A-204ENST00000567270 579 ntTSL 3 BASIC15.45■□□□□ 0.06
PTP4A3O75365 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC15.45■□□□□ 0.06
PTP4A3O75365 IL11-204ENST00000590625 1028 ntTSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 MAPK7-201ENST00000299612 2715 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 RGN-202ENST00000352078 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 ITPK1-210ENST00000556603 3174 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 VKORC1L1-201ENST00000360768 5899 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 PEX6-202ENST00000304611 3478 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
PTP4A3O75365 MGEA5-203ENST00000370094 3314 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC15.45■□□□□ 0.06
PTP4A3O75365 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC15.45■□□□□ 0.06
PTP4A3O75365 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC15.44■□□□□ 0.06
PTP4A3O75365 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PTP4A3O75365 ARL14EP-201ENST00000282032 2430 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 SRF-201ENST00000265354 4202 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC15.44■□□□□ 0.06
PTP4A3O75365 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC15.44■□□□□ 0.06
PTP4A3O75365 APOLD1-202ENST00000356591 4646 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 NPFFR2-202ENST00000344413 1234 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 AC096582.2-201ENST00000510860 516 ntBASIC15.44■□□□□ 0.06
PTP4A3O75365 AP002490.2-201ENST00000524791 560 ntBASIC15.44■□□□□ 0.06
PTP4A3O75365 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC15.44■□□□□ 0.06
PTP4A3O75365 ARL16-209ENST00000573715 763 ntTSL 3 BASIC15.44■□□□□ 0.06
PTP4A3O75365 ARL16-211ENST00000576135 694 ntTSL 3 BASIC15.44■□□□□ 0.06
PTP4A3O75365 AC114341.1-201ENST00000618070 349 ntBASIC15.44■□□□□ 0.06
PTP4A3O75365 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC15.44■□□□□ 0.06
PTP4A3O75365 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 NAIF1-201ENST00000373078 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 TBX18-202ENST00000369663 6245 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 IER3-202ENST00000376377 1350 ntBASIC15.44■□□□□ 0.06
PTP4A3O75365 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
PTP4A3O75365 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC15.44■□□□□ 0.06
PTP4A3O75365 DNAJA3-201ENST00000262375 2763 ntAPPRIS P3 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 ZFAND6-211ENST00000559157 1559 ntTSL 2 BASIC15.44■□□□□ 0.06
PTP4A3O75365 ASB16-AS1-201ENST00000585457 2213 ntTSL 2 BASIC15.44■□□□□ 0.06
PTP4A3O75365 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC15.44■□□□□ 0.06
PTP4A3O75365 DLC1-203ENST00000358919 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 EDN3-202ENST00000337938 2636 ntAPPRIS P4 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
PTP4A3O75365 IGSF8-205ENST00000614243 2191 ntAPPRIS P2 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 CORO6-202ENST00000388767 2397 ntAPPRIS P2 TSL 2 BASIC15.43■□□□□ 0.06
PTP4A3O75365 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 SIGLEC16-201ENST00000599858 1437 ntBASIC15.43■□□□□ 0.06
PTP4A3O75365 PON2-201ENST00000222572 1745 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC15.43■□□□□ 0.06
PTP4A3O75365 AC004817.3-201ENST00000602957 2129 ntBASIC15.43■□□□□ 0.06
PTP4A3O75365 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
PTP4A3O75365 C6orf15-201ENST00000259870 1140 ntAPPRIS P1 TSL 1 (best) BASIC15.43■□□□□ 0.06
Retrieved 100 of 98,524 protein–RNA pairs in 51.8 ms