Protein–RNA interactions for Protein: O75131

CPNE3, Copine-3, humanhuman

Known RBP Predictions only

Length 537 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE3O75131 GPER1-204ENST00000401670 1542 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CPNE3O75131 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.5■□□□□ 0.23
CPNE3O75131 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE3O75131 CORO1C-204ENST00000541050 2487 ntAPPRIS P1 TSL 2 BASIC16.5■□□□□ 0.23
CPNE3O75131 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 KAZN-201ENST00000361144 3838 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 MRPS16-201ENST00000372940 866 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE3O75131 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 AP001062.3-201ENST00000422357 704 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE3O75131 AC005104.2-201ENST00000427818 678 ntBASIC16.5■□□□□ 0.23
CPNE3O75131 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC16.5■□□□□ 0.23
CPNE3O75131 AL133375.1-201ENST00000500590 980 ntTSL 5 BASIC16.5■□□□□ 0.23
CPNE3O75131 LRRC28-210ENST00000558879 581 ntTSL 4 BASIC16.5■□□□□ 0.23
CPNE3O75131 AP005233.2-201ENST00000561588 372 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE3O75131 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC16.5■□□□□ 0.23
CPNE3O75131 MIR4751-201ENST00000578027 74 ntBASIC16.5■□□□□ 0.23
CPNE3O75131 ZDHHC20-202ENST00000382466 5338 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 SCRIB-203ENST00000377533 5108 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 BRPF1-201ENST00000383829 4736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC16.5■□□□□ 0.23
CPNE3O75131 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 KDM6A-212ENST00000543216 5655 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 DCAF5-201ENST00000341516 5953 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.5■□□□□ 0.23
CPNE3O75131 JKAMP-202ENST00000356057 2524 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
CPNE3O75131 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 COQ9-201ENST00000262507 1677 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
CPNE3O75131 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.5■□□□□ 0.23
CPNE3O75131 VAV3-210ENST00000527011 4510 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.49■□□□□ 0.23
CPNE3O75131 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 PLCB2-201ENST00000260402 4616 ntAPPRIS P3 TSL 2 BASIC16.49■□□□□ 0.23
CPNE3O75131 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE3O75131 PIGQ-203ENST00000321878 3006 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 MCOLN1-201ENST00000264079 2082 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE3O75131 AC008764.6-201ENST00000595909 2069 ntBASIC16.49■□□□□ 0.23
CPNE3O75131 RPN2-201ENST00000237530 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 ACSL4-201ENST00000340800 5333 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
CPNE3O75131 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.49■□□□□ 0.23
CPNE3O75131 CMTM2-202ENST00000379486 904 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE3O75131 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
CPNE3O75131 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
CPNE3O75131 CRYGEP-201ENST00000412192 528 ntBASIC16.49■□□□□ 0.23
CPNE3O75131 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 AC108073.2-201ENST00000464002 357 ntBASIC16.49■□□□□ 0.23
CPNE3O75131 IGHV3-65-201ENST00000523210 341 ntBASIC16.49■□□□□ 0.23
CPNE3O75131 MIR3687-2-201ENST00000577708 61 ntBASIC16.49■□□□□ 0.23
CPNE3O75131 AC008667.4-201ENST00000607370 168 ntBASIC16.49■□□□□ 0.23
CPNE3O75131 ACYP2-209ENST00000607452 831 ntTSL 2 BASIC16.49■□□□□ 0.23
CPNE3O75131 MIR3687-1-201ENST00000614492 61 ntBASIC16.49■□□□□ 0.23
CPNE3O75131 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE3O75131 AL805961.1-202ENST00000641562 540 ntBASIC16.49■□□□□ 0.23
CPNE3O75131 COQ8A-201ENST00000366777 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 RPH3AL-222ENST00000618002 2578 ntAPPRIS P2 TSL 5 BASIC16.49■□□□□ 0.23
CPNE3O75131 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 AC138028.4-201ENST00000564984 1845 ntBASIC16.49■□□□□ 0.23
CPNE3O75131 HAPLN3-204ENST00000562889 1547 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE3O75131 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.49■□□□□ 0.23
CPNE3O75131 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 PTPN18-201ENST00000175756 3669 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 ARSA-201ENST00000216124 2050 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
CPNE3O75131 GHRHR-201ENST00000326139 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CPNE3O75131 GPR89P-201ENST00000407924 1495 ntBASIC16.48■□□□□ 0.23
CPNE3O75131 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE3O75131 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 CADM3-201ENST00000368124 2546 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
CPNE3O75131 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.48■□□□□ 0.23
CPNE3O75131 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
CPNE3O75131 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 IGKV4-1-201ENST00000390243 538 ntAPPRIS P1 BASIC16.48■□□□□ 0.23
CPNE3O75131 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 YBX2P1-201ENST00000394192 760 ntBASIC16.48■□□□□ 0.23
CPNE3O75131 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.48■□□□□ 0.23
CPNE3O75131 TIMM17B-202ENST00000396779 1099 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE3O75131 UPF3AP3-201ENST00000420996 769 ntBASIC16.48■□□□□ 0.23
CPNE3O75131 PLA2G12A-202ENST00000502283 1189 ntAPPRIS ALT2 TSL 1 (best) BASIC16.48■□□□□ 0.23
CPNE3O75131 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC16.48■□□□□ 0.23
CPNE3O75131 AC010327.4-202ENST00000591484 748 ntBASIC16.48■□□□□ 0.23
CPNE3O75131 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC16.48■□□□□ 0.23
CPNE3O75131 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC16.48■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 50.9 ms