Protein–RNA interactions for Protein: O60813

PRAMEF11, PRAME family member 11, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF11O60813 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 LGALS1-201ENST00000215909 560 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 KIF25-201ENST00000351261 1326 ntTSL 5 BASIC17.34■□□□□ 0.37
PRAMEF11O60813 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
PRAMEF11O60813 AGTRAP-205ENST00000400895 786 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF11O60813 LBH-204ENST00000406087 559 ntTSL 4 BASIC17.34■□□□□ 0.37
PRAMEF11O60813 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 VN2R19P-201ENST00000442399 1052 ntBASIC17.34■□□□□ 0.37
PRAMEF11O60813 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF11O60813 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF11O60813 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF11O60813 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC17.34■□□□□ 0.37
PRAMEF11O60813 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.34■□□□□ 0.37
PRAMEF11O60813 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 AL021920.2-201ENST00000624828 1351 ntBASIC17.34■□□□□ 0.37
PRAMEF11O60813 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC17.34■□□□□ 0.37
PRAMEF11O60813 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.37
PRAMEF11O60813 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEF11O60813 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEF11O60813 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEF11O60813 EHD2-202ENST00000538399 1766 ntTSL 2 BASIC17.33■□□□□ 0.37
PRAMEF11O60813 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEF11O60813 LMNA-202ENST00000361308 1713 ntTSL 5 BASIC17.33■□□□□ 0.37
PRAMEF11O60813 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.33■□□□□ 0.37
PRAMEF11O60813 LHX9-204ENST00000367391 1623 ntTSL 5 BASIC17.33■□□□□ 0.37
PRAMEF11O60813 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
PRAMEF11O60813 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF11O60813 ZNF259P1-201ENST00000407656 1365 ntBASIC17.33■□□□□ 0.36
PRAMEF11O60813 TUBB8P12-201ENST00000308911 1335 ntBASIC17.33■□□□□ 0.36
PRAMEF11O60813 SARDH-202ENST00000371867 1326 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF11O60813 TUBB7P-202ENST00000428444 1305 ntBASIC17.33■□□□□ 0.36
PRAMEF11O60813 TUBB8P7-204ENST00000567960 1332 ntBASIC17.33■□□□□ 0.36
PRAMEF11O60813 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PRAMEF11O60813 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
PRAMEF11O60813 AL022342.1-201ENST00000400363 863 ntBASIC17.33■□□□□ 0.36
PRAMEF11O60813 ATP6V0CP3-201ENST00000417255 467 ntBASIC17.33■□□□□ 0.36
PRAMEF11O60813 TREML1-203ENST00000437044 647 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF11O60813 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC17.33■□□□□ 0.36
PRAMEF11O60813 AC107918.2-201ENST00000530817 355 ntBASIC17.33■□□□□ 0.36
PRAMEF11O60813 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC17.33■□□□□ 0.36
PRAMEF11O60813 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC17.33■□□□□ 0.36
PRAMEF11O60813 RPS15A-205ENST00000565420 802 ntAPPRIS P1 TSL 2 BASIC17.33■□□□□ 0.36
PRAMEF11O60813 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC17.33■□□□□ 0.36
PRAMEF11O60813 TNFRSF13B-206ENST00000583789 859 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF11O60813 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF11O60813 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.33■□□□□ 0.36
PRAMEF11O60813 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF11O60813 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
PRAMEF11O60813 CSF1-204ENST00000369802 2484 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 SLC39A7-202ENST00000374677 2409 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 AC080080.1-201ENST00000625121 2420 ntBASIC17.32■□□□□ 0.36
PRAMEF11O60813 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 DMAP1-201ENST00000315913 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 CBX3P2-201ENST00000579647 1429 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 MOB3A-201ENST00000357066 3391 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 FAM3D-201ENST00000358781 1319 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 AC129492.6-201ENST00000611383 1305 ntBASIC17.32■□□□□ 0.36
PRAMEF11O60813 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 HUS1B-201ENST00000380907 1025 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 AP1S3-203ENST00000396654 830 ntAPPRIS P2 TSL 2 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 CRYGEP-201ENST00000412192 528 ntBASIC17.32■□□□□ 0.36
PRAMEF11O60813 C1orf226-202ENST00000426197 1049 ntAPPRIS P3 TSL 2 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 DYNC1LI2-202ENST00000440564 1145 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 MRPL49-203ENST00000526171 501 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 CYB561-216ENST00000582297 897 ntTSL 3 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 GGNBP2-212ENST00000613102 2847 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 ADCY1-202ENST00000432715 1693 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 SEMA3B-204ENST00000433753 2755 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 EVPLL-201ENST00000399134 2095 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
PRAMEF11O60813 C17orf62-203ENST00000434650 2050 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC17.32■□□□□ 0.36
PRAMEF11O60813 NDRG2-204ENST00000360463 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC17.31■□□□□ 0.36
PRAMEF11O60813 KRT8P49-201ENST00000604166 1432 ntBASIC17.31■□□□□ 0.36
PRAMEF11O60813 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
PRAMEF11O60813 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 33 ms