Protein–RNA interactions for Protein: O60245

PCDH7, Protocadherin-7, humanhuman

Predictions only

Length 1,069 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH7O60245 RHBG-204ENST00000537040 1789 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 SATB2-202ENST00000417098 5730 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
PCDH7O60245 MGEA5-202ENST00000361464 5155 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 ELN-207ENST00000380562 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 GHRHR-205ENST00000409904 1613 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH7O60245 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
PCDH7O60245 CD244-203ENST00000368034 2463 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 ARHGAP33-201ENST00000007510 2545 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDH7O60245 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.38■□□□□ 0.21
PCDH7O60245 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH7O60245 HCG4P8-203ENST00000443049 980 ntBASIC16.38■□□□□ 0.21
PCDH7O60245 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 AP001269.4-201ENST00000609611 512 ntBASIC16.38■□□□□ 0.21
PCDH7O60245 TXNDC12-205ENST00000610127 806 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH7O60245 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC16.38■□□□□ 0.21
PCDH7O60245 ZNF423-206ENST00000563137 4911 ntAPPRIS ALT2 TSL 5 BASIC16.38■□□□□ 0.21
PCDH7O60245 JPH2-202ENST00000372980 4787 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
PCDH7O60245 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH7O60245 CNTNAP3-205ENST00000377659 2649 ntTSL 2 BASIC16.38■□□□□ 0.21
PCDH7O60245 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.38■□□□□ 0.21
PCDH7O60245 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 NID1-202ENST00000366595 5412 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 GDA-201ENST00000238018 2074 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
PCDH7O60245 LINC00029-201ENST00000370341 1631 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 AL118508.1-201ENST00000613502 2345 ntBASIC16.37■□□□□ 0.21
PCDH7O60245 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDH7O60245 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 AC004817.3-201ENST00000602957 2129 ntBASIC16.37■□□□□ 0.21
PCDH7O60245 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 HYAL3-205ENST00000450982 1402 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 AP005117.1-201ENST00000584346 1413 ntBASIC16.37■□□□□ 0.21
PCDH7O60245 MAN1C1-201ENST00000263979 2627 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH7O60245 SHOX-204ENST00000554971 1902 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCDH7O60245 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH7O60245 HNRNPUL2-BSCL2-201ENST00000403734 4001 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDH7O60245 NFATC4-218ENST00000554966 2506 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 NFATC4-225ENST00000556169 2509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH7O60245 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 AC132008.2-207ENST00000454517 770 ntBASIC16.37■□□□□ 0.21
PCDH7O60245 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH7O60245 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDH7O60245 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH7O60245 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.37■□□□□ 0.21
PCDH7O60245 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDH7O60245 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC16.37■□□□□ 0.21
PCDH7O60245 UBALD1-205ENST00000590891 2641 ntBASIC16.37■□□□□ 0.21
PCDH7O60245 TNRC18P3-201ENST00000441896 2691 ntBASIC16.37■□□□□ 0.21
PCDH7O60245 LRP8-207ENST00000465675 2670 ntTSL 2 BASIC16.37■□□□□ 0.21
PCDH7O60245 LETM2-202ENST00000379957 1873 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
PCDH7O60245 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH7O60245 BRD2-201ENST00000374825 4894 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
PCDH7O60245 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC16.37■□□□□ 0.21
PCDH7O60245 ZNF79-204ENST00000617266 1969 ntTSL 3 BASIC16.37■□□□□ 0.21
PCDH7O60245 CLYBL-203ENST00000376355 6771 ntAPPRIS P1 TSL 2 BASIC16.37■□□□□ 0.21
PCDH7O60245 CA12-203ENST00000422263 2556 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH7O60245 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 NLGN2-201ENST00000302926 4642 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.36■□□□□ 0.21
PCDH7O60245 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.36■□□□□ 0.21
PCDH7O60245 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 LRRC38-201ENST00000376085 2209 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 FAM86B2-202ENST00000309608 806 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH7O60245 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH7O60245 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC16.36■□□□□ 0.21
PCDH7O60245 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC16.36■□□□□ 0.21
PCDH7O60245 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH7O60245 AC016876.1-204ENST00000573187 679 ntTSL 3 BASIC16.36■□□□□ 0.21
PCDH7O60245 MIR3652-201ENST00000579335 131 ntBASIC16.36■□□□□ 0.21
PCDH7O60245 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 AL732292.2-201ENST00000609649 430 ntBASIC16.36■□□□□ 0.21
PCDH7O60245 PRX-202ENST00000324001 4855 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
PCDH7O60245 DNASE1L2-201ENST00000320700 1326 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 34 ms