Protein–RNA interactions for Protein: O43181

NDUFS4, NADH dehydrogenase [ubiquinone] iron-sulfur protein 4, mitochondrial, humanhuman

Predictions only

Length 175 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFS4O43181 ZNF500-201ENST00000219478 5880 ntAPPRIS P1 TSL 2 BASIC16.43■□□□□ 0.22
NDUFS4O43181 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 LRRTM1-202ENST00000409148 2126 ntAPPRIS P1 TSL 4 BASIC16.43■□□□□ 0.22
NDUFS4O43181 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC16.43■□□□□ 0.22
NDUFS4O43181 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.43■□□□□ 0.22
NDUFS4O43181 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
NDUFS4O43181 AC092053.1-201ENST00000605787 1936 ntBASIC16.43■□□□□ 0.22
NDUFS4O43181 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.43■□□□□ 0.22
NDUFS4O43181 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFS4O43181 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.43■□□□□ 0.22
NDUFS4O43181 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.43■□□□□ 0.22
NDUFS4O43181 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS4O43181 PPP1R3E-201ENST00000452015 4773 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS4O43181 GPR89P-201ENST00000407924 1495 ntBASIC16.42■□□□□ 0.22
NDUFS4O43181 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 EPB41L5-203ENST00000443124 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS4O43181 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 INIP-202ENST00000374236 874 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS4O43181 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC16.42■□□□□ 0.22
NDUFS4O43181 ELK2BP-201ENST00000415014 1224 ntBASIC16.42■□□□□ 0.22
NDUFS4O43181 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS4O43181 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.42■□□□□ 0.22
NDUFS4O43181 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 CNOT8-225ENST00000524105 904 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS4O43181 NCAM1-AS1-202ENST00000533638 618 ntTSL 4 BASIC16.42■□□□□ 0.22
NDUFS4O43181 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS4O43181 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC16.42■□□□□ 0.22
NDUFS4O43181 TMEM106C-214ENST00000550161 976 ntTSL 3 BASIC16.42■□□□□ 0.22
NDUFS4O43181 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.42■□□□□ 0.22
NDUFS4O43181 IER2-202ENST00000587885 1291 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
NDUFS4O43181 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC16.42■□□□□ 0.22
NDUFS4O43181 AC092902.2-205ENST00000622381 394 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFS4O43181 PML-206ENST00000395135 2199 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFS4O43181 KCTD2-201ENST00000322444 3635 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 ILVBL-209ENST00000534378 2067 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFS4O43181 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.42■□□□□ 0.22
NDUFS4O43181 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 TNIP1-208ENST00000520931 2680 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
NDUFS4O43181 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
NDUFS4O43181 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 SLC8A3-203ENST00000357887 5259 ntTSL 5 BASIC16.41■□□□□ 0.22
NDUFS4O43181 SLC8A3-204ENST00000381269 5268 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
NDUFS4O43181 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 KRT85-202ENST00000544265 1387 ntTSL 2 BASIC16.41■□□□□ 0.22
NDUFS4O43181 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NDUFS4O43181 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
NDUFS4O43181 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 TRIM36-203ENST00000379618 693 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC16.41■□□□□ 0.22
NDUFS4O43181 FAU-209ENST00000531743 697 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC16.41■□□□□ 0.22
NDUFS4O43181 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC16.41■□□□□ 0.22
NDUFS4O43181 AP001005.1-201ENST00000571755 1248 ntBASIC16.41■□□□□ 0.22
NDUFS4O43181 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC16.41■□□□□ 0.22
NDUFS4O43181 MIR7706-201ENST00000613747 67 ntBASIC16.41■□□□□ 0.22
NDUFS4O43181 MIR1199-201ENST00000621445 119 ntBASIC16.41■□□□□ 0.22
NDUFS4O43181 AC006504.4-201ENST00000592118 1568 ntBASIC16.41■□□□□ 0.22
NDUFS4O43181 VPS51-201ENST00000279281 2714 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
NDUFS4O43181 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.41■□□□□ 0.22
NDUFS4O43181 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 AL590787.1-201ENST00000568856 1315 ntBASIC16.41■□□□□ 0.22
NDUFS4O43181 FAM53B-AS1-202ENST00000448422 1491 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 AL121761.2-201ENST00000598007 1648 ntBASIC16.41■□□□□ 0.22
NDUFS4O43181 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
NDUFS4O43181 TSPAN3-201ENST00000267970 6467 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFS4O43181 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFS4O43181 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.4■□□□□ 0.22
NDUFS4O43181 SMCHD1-201ENST00000320876 8821 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
NDUFS4O43181 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFS4O43181 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFS4O43181 CPEB2-204ENST00000382401 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFS4O43181 HBQ1-201ENST00000199708 536 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFS4O43181 EXOSC4-201ENST00000316052 887 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFS4O43181 CD1E-209ENST00000368164 869 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFS4O43181 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFS4O43181 AC026396.1-201ENST00000419388 421 ntBASIC16.4■□□□□ 0.22
NDUFS4O43181 KRT18P27-201ENST00000427733 1299 ntBASIC16.4■□□□□ 0.22
NDUFS4O43181 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
NDUFS4O43181 AC093909.1-201ENST00000504731 1122 ntBASIC16.4■□□□□ 0.22
NDUFS4O43181 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms