Protein–RNA interactions for Protein: O15255

RTL8C, CAAX box protein 1, humanhuman

Predictions only

Length 209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL8CO15255 PPP1R14A-203ENST00000587515 607 ntTSL 2 BASIC11.39□□□□□ -0.59
RTL8CO15255 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC11.39□□□□□ -0.59
RTL8CO15255 LINC02560-201ENST00000596379 459 ntBASIC11.39□□□□□ -0.59
RTL8CO15255 GMFG-207ENST00000598034 1028 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC11.39□□□□□ -0.59
RTL8CO15255 AC008761.3-201ENST00000624803 892 ntBASIC11.39□□□□□ -0.59
RTL8CO15255 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC11.39□□□□□ -0.59
RTL8CO15255 AL645728.2-201ENST00000641974 660 ntBASIC11.39□□□□□ -0.59
RTL8CO15255 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 USP18-201ENST00000215794 2129 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC11.39□□□□□ -0.59
RTL8CO15255 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC11.39□□□□□ -0.59
RTL8CO15255 FLJ13224-201ENST00000313737 1514 ntBASIC11.39□□□□□ -0.59
RTL8CO15255 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC11.39□□□□□ -0.59
RTL8CO15255 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 KLHL40-201ENST00000287777 2517 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 ZNF804A-201ENST00000302277 4690 ntAPPRIS P1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC11.39□□□□□ -0.59
RTL8CO15255 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC11.39□□□□□ -0.59
RTL8CO15255 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 HNRNPK-202ENST00000360384 2038 ntAPPRIS ALT1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC11.38□□□□□ -0.59
RTL8CO15255 COMMD5-202ENST00000402718 1305 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 IGLL5-203ENST00000532223 1335 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 TRIP6-209ENST00000619988 1303 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 SLCO4A1-AS1-202ENST00000433126 1420 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC11.38□□□□□ -0.59
RTL8CO15255 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 PLXNB3-201ENST00000361971 6146 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 RPL21-203ENST00000319826 806 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 POP5-202ENST00000357500 801 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 FNDC11-202ENST00000370098 1112 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 BAD-202ENST00000394531 631 ntTSL 3 BASIC11.38□□□□□ -0.59
RTL8CO15255 RAC2-204ENST00000406508 893 ntTSL 5 BASIC11.38□□□□□ -0.59
RTL8CO15255 TREML5P-201ENST00000421694 576 ntBASIC11.38□□□□□ -0.59
RTL8CO15255 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 FAM207CP-201ENST00000443486 507 ntBASIC11.38□□□□□ -0.59
RTL8CO15255 TMEM176B-205ENST00000450753 1006 ntTSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 IL32-212ENST00000526464 1198 ntAPPRIS P4 TSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 IL32-217ENST00000530538 674 ntAPPRIS P4 TSL 3 BASIC11.38□□□□□ -0.59
RTL8CO15255 SLC25A39P2-201ENST00000537614 270 ntBASIC11.38□□□□□ -0.59
RTL8CO15255 BAD-207ENST00000544785 525 ntTSL 3 BASIC11.38□□□□□ -0.59
RTL8CO15255 DUX4L17-201ENST00000557360 1267 ntBASIC11.38□□□□□ -0.59
RTL8CO15255 AC140878.1-201ENST00000565277 250 ntBASIC11.38□□□□□ -0.59
RTL8CO15255 RARRES2P8-201ENST00000566335 367 ntBASIC11.38□□□□□ -0.59
RTL8CO15255 AC067852.1-201ENST00000585572 594 ntTSL 4 BASIC11.38□□□□□ -0.59
RTL8CO15255 MOB3A-209ENST00000592280 1071 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 AL390754.1-201ENST00000619088 582 ntBASIC11.38□□□□□ -0.59
RTL8CO15255 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC11.38□□□□□ -0.59
RTL8CO15255 AL135999.2-201ENST00000622438 1686 ntBASIC11.38□□□□□ -0.59
RTL8CO15255 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC11.38□□□□□ -0.59
RTL8CO15255 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 HARS-203ENST00000431330 1774 ntTSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 TNFRSF13B-201ENST00000261652 1357 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 SLC23A3-203ENST00000409878 2010 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 ACTN4-201ENST00000252699 4963 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC11.38□□□□□ -0.59
RTL8CO15255 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
RTL8CO15255 PEG3-206ENST00000598410 5304 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
RTL8CO15255 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTL8CO15255 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC11.37□□□□□ -0.59
RTL8CO15255 AKAP8P1-201ENST00000434743 1349 ntBASIC11.37□□□□□ -0.59
RTL8CO15255 SDC2-202ENST00000518385 1583 ntTSL 5 BASIC11.37□□□□□ -0.59
RTL8CO15255 MADD-208ENST00000405573 1823 ntTSL 5 BASIC11.37□□□□□ -0.59
RTL8CO15255 ACSM2B-208ENST00000565322 1834 ntTSL 2 BASIC11.37□□□□□ -0.59
RTL8CO15255 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTL8CO15255 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC11.37□□□□□ -0.59
RTL8CO15255 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
RTL8CO15255 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms