Protein–RNA interactions for Protein: O00370

LINE-1 retrotransposable element ORF2 protein, humanhuman

Predictions only

Length 1,275 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
O00370 XXYLT1-205ENST00000437101 2149 ntTSL 2 BASIC18.28■□□□□ 0.52
O00370 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 DBI-201ENST00000311521 714 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC18.28■□□□□ 0.52
O00370 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 MCFD2-208ENST00000409973 821 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
O00370 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC18.28■□□□□ 0.52
O00370 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC18.28■□□□□ 0.52
O00370 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC18.28■□□□□ 0.52
O00370 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC18.28■□□□□ 0.52
O00370 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC18.28■□□□□ 0.52
O00370 SLC25A6P4-201ENST00000586535 553 ntBASIC18.28■□□□□ 0.52
O00370 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
O00370 VPS13B-201ENST00000355155 2822 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 LINC02012-201ENST00000608206 1725 ntBASIC18.28■□□□□ 0.52
O00370 TFAP2D-201ENST00000008391 1711 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC18.28■□□□□ 0.52
O00370 ARL13B-203ENST00000394222 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 SPRED2-206ENST00000443619 1800 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
O00370 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
O00370 RTCA-203ENST00000370128 2535 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
O00370 ASIC3-203ENST00000357922 2232 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
O00370 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC18.27■□□□□ 0.52
O00370 AL590787.1-201ENST00000568856 1315 ntBASIC18.27■□□□□ 0.52
O00370 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC18.27■□□□□ 0.52
O00370 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC18.27■□□□□ 0.52
O00370 PODNL1-202ENST00000339560 2165 ntAPPRIS P3 TSL 1 (best) BASIC18.27■□□□□ 0.52
O00370 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC18.27■□□□□ 0.52
O00370 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC18.27■□□□□ 0.52
O00370 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC18.27■□□□□ 0.52
O00370 KRT18P27-201ENST00000427733 1299 ntBASIC18.27■□□□□ 0.52
O00370 ARTN-206ENST00000472435 402 ntTSL 3 BASIC18.27■□□□□ 0.52
O00370 RNA5SP419-201ENST00000515908 135 ntBASIC18.27■□□□□ 0.52
O00370 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC18.27■□□□□ 0.52
O00370 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC18.27■□□□□ 0.52
O00370 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.27■□□□□ 0.52
O00370 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC18.27■□□□□ 0.52
O00370 ARMC7-204ENST00000582136 1204 ntTSL 2 BASIC18.27■□□□□ 0.52
O00370 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC18.27■□□□□ 0.52
O00370 FAM215A-202ENST00000632077 792 ntBASIC18.27■□□□□ 0.52
O00370 KRT23-201ENST00000209718 1987 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.52
O00370 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC18.27■□□□□ 0.52
O00370 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC18.27■□□□□ 0.51
O00370 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC18.27■□□□□ 0.51
O00370 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC18.27■□□□□ 0.51
O00370 AC092053.1-201ENST00000605787 1936 ntBASIC18.27■□□□□ 0.51
O00370 AL139384.1-201ENST00000612143 3047 ntBASIC18.27■□□□□ 0.51
O00370 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC18.27■□□□□ 0.51
O00370 GFAP-203ENST00000435360 1779 ntTSL 2 BASIC18.27■□□□□ 0.51
O00370 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC18.27■□□□□ 0.51
O00370 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 LINC00894-202ENST00000425602 1597 ntTSL 2 BASIC18.26■□□□□ 0.51
O00370 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC18.26■□□□□ 0.51
O00370 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.26■□□□□ 0.51
O00370 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.26■□□□□ 0.51
O00370 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC18.26■□□□□ 0.51
O00370 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC18.26■□□□□ 0.51
O00370 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC18.26■□□□□ 0.51
O00370 USP27X-AS1-201ENST00000437322 2175 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 GYG2P1-204ENST00000382966 639 ntTSL 3 BASIC18.26■□□□□ 0.51
O00370 ELK2BP-201ENST00000415014 1224 ntBASIC18.26■□□□□ 0.51
O00370 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC18.26■□□□□ 0.51
O00370 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC18.26■□□□□ 0.51
O00370 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC18.26■□□□□ 0.51
O00370 AC006557.2-201ENST00000592985 1240 ntBASIC18.26■□□□□ 0.51
O00370 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC18.26■□□□□ 0.51
O00370 SMIM22-210ENST00000615471 928 ntAPPRIS ALT2 TSL 3 BASIC18.26■□□□□ 0.51
O00370 AL773604.1-201ENST00000617417 272 ntBASIC18.26■□□□□ 0.51
O00370 AC008735.5-201ENST00000623544 497 ntBASIC18.26■□□□□ 0.51
O00370 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 DAGLB-202ENST00000425398 2044 ntTSL 2 BASIC18.26■□□□□ 0.51
O00370 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.26■□□□□ 0.51
O00370 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC18.26■□□□□ 0.51
O00370 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC18.26■□□□□ 0.51
O00370 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 RABGGTA-201ENST00000216840 2088 ntAPPRIS P1 TSL 1 (best) BASIC18.26■□□□□ 0.51
O00370 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC18.25■□□□□ 0.51
O00370 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
O00370 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC18.25■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 77.4 ms