Protein–RNA interactions for Protein: O00322

UPK1A, Uroplakin-1a, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPK1AO00322 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 MC1R-204ENST00000639847 2567 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UPK1AO00322 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 PGR-209ENST00000617858 2816 ntTSL 5 BASIC16.27■□□□□ 0.2
UPK1AO00322 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
UPK1AO00322 AC003669.1-201ENST00000334569 611 ntBASIC16.27■□□□□ 0.2
UPK1AO00322 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
UPK1AO00322 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC16.27■□□□□ 0.2
UPK1AO00322 NAT6-202ENST00000417393 1163 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 NKTR-203ENST00000442970 646 ntTSL 2 BASIC16.27■□□□□ 0.2
UPK1AO00322 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.2
UPK1AO00322 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 AC138894.3-201ENST00000603787 634 ntBASIC16.27■□□□□ 0.2
UPK1AO00322 AP000867.4-201ENST00000641616 219 ntBASIC16.27■□□□□ 0.2
UPK1AO00322 FAM156B-207ENST00000616419 2032 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
UPK1AO00322 FAM156A-212ENST00000617970 2032 ntAPPRIS P2 TSL 2 BASIC16.27■□□□□ 0.2
UPK1AO00322 CHKA-201ENST00000265689 2530 ntAPPRIS P4 TSL 1 (best) BASIC16.27■□□□□ 0.2
UPK1AO00322 PLPPR2-201ENST00000251473 2727 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
UPK1AO00322 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UPK1AO00322 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UPK1AO00322 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
UPK1AO00322 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC16.27■□□□□ 0.19
UPK1AO00322 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC16.27■□□□□ 0.19
UPK1AO00322 SERTM1-201ENST00000315190 3207 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 SPIN3-224ENST00000639583 2245 ntTSL 5 BASIC16.26■□□□□ 0.19
UPK1AO00322 CHFR-203ENST00000432561 2648 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 TMC3-AS1-203ENST00000559781 2195 ntTSL 3 BASIC16.26■□□□□ 0.19
UPK1AO00322 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
UPK1AO00322 SBSPON-201ENST00000297354 3801 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 QRFP-201ENST00000343079 411 ntAPPRIS P1 BASIC16.26■□□□□ 0.19
UPK1AO00322 HCG4P8-203ENST00000443049 980 ntBASIC16.26■□□□□ 0.19
UPK1AO00322 ST20-202ENST00000485386 529 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 NMU-205ENST00000511469 756 ntTSL 3 BASIC16.26■□□□□ 0.19
UPK1AO00322 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.26■□□□□ 0.19
UPK1AO00322 FLT3LG-206ENST00000597551 951 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 NFIB-212ENST00000622520 1274 ntTSL 5 BASIC16.26■□□□□ 0.19
UPK1AO00322 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC16.26■□□□□ 0.19
UPK1AO00322 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC16.26■□□□□ 0.19
UPK1AO00322 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC16.26■□□□□ 0.19
UPK1AO00322 AIFM3-201ENST00000399163 2309 ntAPPRIS ALT1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 CYP2T1P-202ENST00000641596 2535 ntBASIC16.26■□□□□ 0.19
UPK1AO00322 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.26■□□□□ 0.19
UPK1AO00322 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
UPK1AO00322 CFAP100-201ENST00000352312 2086 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
UPK1AO00322 DCST1-201ENST00000295542 2279 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
UPK1AO00322 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 RBM47-212ENST00000514014 2419 ntTSL 2 BASIC16.26■□□□□ 0.19
UPK1AO00322 RAI2-206ENST00000545871 2421 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
UPK1AO00322 SDC4-201ENST00000372733 2613 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 TIGD2-202ENST00000603357 3217 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
UPK1AO00322 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 MCMBP-201ENST00000360003 4169 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
UPK1AO00322 SASH1-201ENST00000367467 7711 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 DOLPP1-202ENST00000372546 2177 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 CDKN2B-AS1-208ENST00000580576 2175 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
UPK1AO00322 RASIP1-201ENST00000222145 3308 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 HNF1A-215ENST00000615446 2344 ntTSL 5 BASIC16.25■□□□□ 0.19
UPK1AO00322 AC093525.9-201ENST00000624961 1746 ntBASIC16.25■□□□□ 0.19
UPK1AO00322 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC16.25■□□□□ 0.19
UPK1AO00322 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 EPN1-203ENST00000411543 2621 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 CELF6-204ENST00000543764 1676 ntTSL 2 BASIC16.25■□□□□ 0.19
UPK1AO00322 CCDC188-201ENST00000439765 1475 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UPK1AO00322 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UPK1AO00322 LRRC59-201ENST00000225972 2910 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC16.25■□□□□ 0.19
UPK1AO00322 GOSR2-202ENST00000393456 788 ntTSL 3 BASIC16.25■□□□□ 0.19
UPK1AO00322 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.25■□□□□ 0.19
UPK1AO00322 KLF4P1-201ENST00000412782 1185 ntBASIC16.25■□□□□ 0.19
UPK1AO00322 SRP19-202ENST00000445150 833 ntTSL 2 BASIC16.25■□□□□ 0.19
UPK1AO00322 KRT16P4-201ENST00000453883 522 ntBASIC16.25■□□□□ 0.19
UPK1AO00322 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC16.25■□□□□ 0.19
UPK1AO00322 FOSL1P1-201ENST00000511041 816 ntBASIC16.25■□□□□ 0.19
UPK1AO00322 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC16.25■□□□□ 0.19
UPK1AO00322 TMEM220-AS1-202ENST00000580899 561 ntTSL 4 BASIC16.25■□□□□ 0.19
UPK1AO00322 AL591684.3-201ENST00000605187 298 ntBASIC16.25■□□□□ 0.19
UPK1AO00322 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
UPK1AO00322 CDKN1A-201ENST00000244741 2180 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 SEPT9-202ENST00000423034 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC16.25■□□□□ 0.19
UPK1AO00322 AC104809.1-201ENST00000425110 2345 ntTSL 2 BASIC16.25■□□□□ 0.19
UPK1AO00322 AC007950.2-201ENST00000615045 2347 ntBASIC16.25■□□□□ 0.19
UPK1AO00322 TTC29-205ENST00000504425 1777 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
UPK1AO00322 ALPPL2-201ENST00000295453 2493 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 TRPC3-202ENST00000379645 3548 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
UPK1AO00322 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms