Protein–RNA interactions for Protein: H3BVE0

BOLA2-SMG1P6, BOLA2-SMG1P6 readthrough (Fragment), humanhuman

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BOLA2-SMG1P6H3BVE0 GEM-202ENST00000396194 2103 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 WARS-232ENST00000556645 2508 ntTSL 5 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 PWWP2A-201ENST00000307063 3346 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 HOXC11-202ENST00000546378 3261 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 LGMN-201ENST00000334869 2055 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 ME3-201ENST00000323418 1068 ntTSL 5 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 RASGRP2-209ENST00000394429 453 ntTSL 3 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC099681.3-201ENST00000421500 939 ntTSL 4 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC104986.2-201ENST00000521696 380 ntTSL 2 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 LINC01976-201ENST00000565120 434 ntTSL 2 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 Z92544.1-201ENST00000567091 730 ntTSL 3 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC005789.1-201ENST00000585411 297 ntTSL 3 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC016405.3-201ENST00000607710 860 ntBASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 GGTLC3-201ENST00000619998 968 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 NFKB2-204ENST00000428099 3416 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 ASAH1-249ENST00000637528 2215 ntTSL 5 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 ATG13-216ENST00000530500 2030 ntTSL 2 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC004805.1-201ENST00000577662 1616 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CYP21A2-221ENST00000418967 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CASP2-201ENST00000310447 4225 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 BNIP3-201ENST00000368636 2861 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 PCBP4-205ENST00000461554 2147 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 MAGI3-203ENST00000369615 6508 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 SMARCA4-203ENST00000429416 5691 ntTSL 2 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 C19orf48-201ENST00000345523 1503 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CARD10-203ENST00000406271 3127 ntTSL 2 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 PITPNM2-208ENST00000542749 6660 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 FADS2-202ENST00000278840 3630 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 NEURL1-201ENST00000369780 4314 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 LINC02370-201ENST00000428272 2009 ntTSL 5 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 TUB-AS1-201ENST00000506601 2021 ntTSL 2 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 IRF2BP2-202ENST00000366610 4615 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 DBF4-201ENST00000265728 3907 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 ADCY7-208ENST00000566433 2535 ntTSL 5 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 SDCBP-201ENST00000260130 2167 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 DUS2-207ENST00000565263 2310 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 PRDM15-201ENST00000269844 4881 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 GCC2-AS1-201ENST00000322353 558 ntTSL 2 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 UNC5A-201ENST00000329542 3812 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 IZUMO4-203ENST00000395307 944 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 BET1L-204ENST00000410108 637 ntTSL 3 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 ZNF561-AS1-205ENST00000588765 579 ntTSL 4 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 DMRTC2-201ENST00000269945 1792 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 MEG3-206ENST00000423456 1771 ntTSL 2 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 DNM1-201ENST00000341179 3254 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 FUT5-201ENST00000252675 1916 ntAPPRIS P1 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 OSGIN1-203ENST00000393306 1940 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 APCDD1L-201ENST00000371149 3426 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 PVR-203ENST00000403059 3078 ntAPPRIS ALT2 TSL 2 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CACNA1G-201ENST00000352832 7848 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 ANKHD1-202ENST00000297183 7606 ntTSL 5 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 FN1-208ENST00000426059 2388 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 SLC2A9-201ENST00000264784 1850 ntAPPRIS P4 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 GLB1L2-201ENST00000339772 3152 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 FNDC1-201ENST00000297267 6552 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 BRCC3-201ENST00000330045 2496 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CALHM2-202ENST00000369788 1843 ntAPPRIS P1 TSL 2 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 TMEM189-203ENST00000371656 1973 ntTSL 2 BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 GOPC-203ENST00000535237 4460 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 PTK7-210ENST00000471863 2412 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 MINDY4-201ENST00000265299 2733 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 CA12-202ENST00000344366 2744 ntAPPRIS ALT2 TSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 NRN1-201ENST00000244766 1624 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
BOLA2-SMG1P6H3BVE0 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Retrieved 100 of 98,524 protein–RNA pairs in 43.1 ms