Protein–RNA interactions for Protein: A6NDB9

PALM3, Paralemmin-3, humanhuman

Predicted RBP Predictions only

Length 673 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PALM3A6NDB9 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 EEF1D-223ENST00000528610 923 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PALM3A6NDB9 IL18BP-211ENST00000531053 853 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 MAL2-202ENST00000531508 892 ntTSL 3 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 KIRREL3-AS1-201ENST00000548204 586 ntTSL 3 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 COX5A-206ENST00000568783 571 ntTSL 3 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 AL513190.1-201ENST00000621254 727 ntBASIC19.72■□□□□ 0.75
PALM3A6NDB9 AC004877.2-201ENST00000623941 599 ntBASIC19.72■□□□□ 0.75
PALM3A6NDB9 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
PALM3A6NDB9 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
PALM3A6NDB9 NRG1-216ENST00000523079 2359 ntTSL 2 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PALM3A6NDB9 ZNF746-202ENST00000458143 3797 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PALM3A6NDB9 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
PALM3A6NDB9 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
PALM3A6NDB9 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC19.72■□□□□ 0.75
PALM3A6NDB9 ANKRD23-202ENST00000331001 2455 ntTSL 2 BASIC19.71■□□□□ 0.75
PALM3A6NDB9 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC19.71■□□□□ 0.75
PALM3A6NDB9 FBXO7-201ENST00000266087 2195 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PALM3A6NDB9 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.71■□□□□ 0.75
PALM3A6NDB9 DUS3L-202ENST00000320699 1355 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PALM3A6NDB9 TOP3BP1-201ENST00000420768 1380 ntBASIC19.71■□□□□ 0.75
PALM3A6NDB9 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PALM3A6NDB9 KCNK7-203ENST00000394216 1563 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PALM3A6NDB9 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PALM3A6NDB9 FCN2-201ENST00000291744 1057 ntAPPRIS P2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PALM3A6NDB9 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
PALM3A6NDB9 HELT-201ENST00000338875 1008 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
PALM3A6NDB9 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC19.71■□□□□ 0.75
PALM3A6NDB9 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
PALM3A6NDB9 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
PALM3A6NDB9 CD63-210ENST00000550776 870 ntTSL 5 BASIC19.71■□□□□ 0.75
PALM3A6NDB9 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PALM3A6NDB9 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC19.71■□□□□ 0.75
PALM3A6NDB9 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC19.71■□□□□ 0.75
PALM3A6NDB9 AC092068.3-201ENST00000587894 2016 ntBASIC19.71■□□□□ 0.75
PALM3A6NDB9 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
PALM3A6NDB9 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC19.71■□□□□ 0.75
PALM3A6NDB9 WT1-201ENST00000332351 3122 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
PALM3A6NDB9 GSS-201ENST00000216951 1922 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 TTLL10-201ENST00000379288 2114 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 NFE2-202ENST00000435572 1762 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 ZNF773-201ENST00000282292 2206 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC19.7■□□□□ 0.74
PALM3A6NDB9 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 GOLGA6L2-204ENST00000567107 3030 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
PALM3A6NDB9 STX10-201ENST00000242770 1099 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 KRTCAP2-201ENST00000295682 552 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.7■□□□□ 0.74
PALM3A6NDB9 Z97056.1-201ENST00000433230 556 ntTSL 2 BASIC19.7■□□□□ 0.74
PALM3A6NDB9 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC19.7■□□□□ 0.74
PALM3A6NDB9 KRT19P2-202ENST00000557173 1012 ntBASIC19.7■□□□□ 0.74
PALM3A6NDB9 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
PALM3A6NDB9 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC19.7■□□□□ 0.74
PALM3A6NDB9 STX10-204ENST00000587230 1136 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC19.7■□□□□ 0.74
PALM3A6NDB9 RPL27-206ENST00000589913 697 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 AC008403.2-204ENST00000600650 1006 ntTSL 3 BASIC19.7■□□□□ 0.74
PALM3A6NDB9 BSG-214ENST00000614867 960 ntTSL 3 BASIC19.7■□□□□ 0.74
PALM3A6NDB9 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 C14orf28-201ENST00000325192 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC19.7■□□□□ 0.74
PALM3A6NDB9 RSRP1-201ENST00000243189 1502 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 UBE2G1-204ENST00000572484 1514 ntTSL 5 BASIC19.7■□□□□ 0.74
PALM3A6NDB9 PRMT1-202ENST00000454376 1327 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 CDC25A-201ENST00000302506 3783 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
PALM3A6NDB9 AC060834.1-201ENST00000443027 2032 ntBASIC19.69■□□□□ 0.74
PALM3A6NDB9 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PALM3A6NDB9 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC19.69■□□□□ 0.74
PALM3A6NDB9 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC19.69■□□□□ 0.74
PALM3A6NDB9 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PALM3A6NDB9 TSPAN4-205ENST00000397406 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PALM3A6NDB9 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC19.69■□□□□ 0.74
PALM3A6NDB9 KRT8P49-201ENST00000604166 1432 ntBASIC19.69■□□□□ 0.74
PALM3A6NDB9 ADAMTSL1-202ENST00000327883 1864 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
PALM3A6NDB9 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PALM3A6NDB9 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.69■□□□□ 0.74
PALM3A6NDB9 ARHGEF4-206ENST00000428230 2172 ntTSL 5 BASIC19.69■□□□□ 0.74
PALM3A6NDB9 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC19.69■□□□□ 0.74
PALM3A6NDB9 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
PALM3A6NDB9 NDUFA3-201ENST00000303553 379 ntTSL 2 BASIC19.69■□□□□ 0.74
PALM3A6NDB9 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC19.69■□□□□ 0.74
PALM3A6NDB9 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC19.69■□□□□ 0.74
PALM3A6NDB9 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC19.69■□□□□ 0.74
PALM3A6NDB9 AC004832.2-201ENST00000426397 482 ntBASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 84 ms