Protein–RNA interactions for Protein: Q9Y5G1

PCDHGB3, Protocadherin gamma-B3, humanhuman

Predictions only

Length 929 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3Q9Y5G1 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 AL391005.1-201ENST00000623953 2435 ntBASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 DKFZP434K028-202ENST00000536405 2466 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 C6orf48-204ENST00000375639 712 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 CAMTA1-IT1-201ENST00000427317 365 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 ACP6-203ENST00000487562 1258 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 CUTA-210ENST00000488034 769 ntAPPRIS ALT1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 INPP5B-201ENST00000373021 3934 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 JMJD6-205ENST00000585429 1330 ntTSL 5 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 NFATC2-205ENST00000609507 2662 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 AC060834.1-201ENST00000443027 2032 ntBASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 KRT86-201ENST00000293525 2091 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 LYSMD4-203ENST00000378904 2122 ntBASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 ZNF619-205ENST00000456778 2192 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 SLX1A-SULT1A3-202ENST00000565342 2195 ntTSL 2 BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 PCDHA6-202ENST00000527624 2231 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 SLC35G1-202ENST00000427197 2402 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
PCDHGB3Q9Y5G1 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 FEM1C-201ENST00000274457 5816 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 EPB41L3-204ENST00000540638 3370 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 SCAF8-201ENST00000367178 5057 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 C10orf10-201ENST00000298295 2120 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 CARNS1-201ENST00000307823 3942 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 C1QC-201ENST00000374637 1089 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 TP73-208ENST00000378295 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 RPAIN-203ENST00000381209 1535 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 DYNLL1-203ENST00000392509 814 ntAPPRIS P1 TSL 3 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 POM121L3P-201ENST00000419331 1163 ntBASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 SH3BP5-206ENST00000426925 2190 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 KRT18P31-201ENST00000506277 1292 ntBASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 LARP4-210ENST00000522085 1577 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 TPM1-218ENST00000559281 851 ntTSL 5 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 AC074051.2-201ENST00000565115 352 ntBASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 ZSCAN1-203ENST00000601162 813 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 MCM7-203ENST00000354230 2975 ntTSL 2 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 JAK3-201ENST00000458235 5432 ntAPPRIS P2 TSL 5 BASIC16.32■□□□□ 0.2
PCDHGB3Q9Y5G1 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 TLE3-205ENST00000539550 2464 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 NELFA-216ENST00000542778 2465 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 AC018695.7-201ENST00000624587 2492 ntBASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 RNF19A-201ENST00000341084 4285 ntAPPRIS P1 TSL 5 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 RNF34-201ENST00000361234 2066 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 ICAM3-205ENST00000589261 2024 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 AC116353.5-201ENST00000638148 1699 ntBASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 IL18BP-214ENST00000620017 1566 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 NFATC4-223ENST00000555802 1476 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 EIF4G3-205ENST00000400422 5762 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 PPA2-202ENST00000348706 1414 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 UBE2R2-201ENST00000263228 4075 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 ARL4C-202ENST00000390645 4013 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 CLDN14-203ENST00000399136 1330 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
PCDHGB3Q9Y5G1 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms