Protein–RNA interactions for Protein: Q9Y5F2

PCDHB11, Protocadherin beta-11, humanhuman

Predictions only

Length 797 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB11Q9Y5F2 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 ENPP1-201ENST00000360971 7442 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 HMBS-203ENST00000442944 1548 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 CLDN15-208ENST00000611078 1509 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 CFC1-202ENST00000615342 1554 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 PCBP4-203ENST00000428823 1835 ntTSL 5 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 PCDHA12-202ENST00000613593 2588 ntBASIC16.84■□□□□ 0.29
PCDHB11Q9Y5F2 FGFR4-207ENST00000502906 2638 ntAPPRIS P4 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHB11Q9Y5F2 NPTN-202ENST00000351217 2817 ntTSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHB11Q9Y5F2 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHB11Q9Y5F2 PCDHA7-202ENST00000525929 5221 ntAPPRIS P2 TSL 1 (best) BASIC16.83■□□□□ 0.29
PCDHB11Q9Y5F2 PABPC1L-201ENST00000217073 1851 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 MRPL55-208ENST00000366734 990 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 MRPL55-217ENST00000366746 565 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 PMP22-202ENST00000395936 816 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 CENPM-203ENST00000402338 1002 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 MRPS12-203ENST00000407800 1220 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 GGCT-205ENST00000409436 954 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 PMS2P2-201ENST00000425039 1128 ntBASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 AC004967.1-201ENST00000453589 447 ntBASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 BX005266.1-201ENST00000473402 457 ntBASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 AC112482.1-201ENST00000492080 688 ntBASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 NDUFA6-202ENST00000498737 1256 ntTSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 TRIM60-203ENST00000508504 1674 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 GPBAR1-204ENST00000522678 2003 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 ARHGAP27-214ENST00000532891 2604 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 MIR22HG-204ENST00000571595 767 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 TMEM220-203ENST00000578345 559 ntAPPRIS ALT2 TSL 2 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 NDUFA6-203ENST00000602404 1080 ntAPPRIS P1 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 ISLR2-203ENST00000435464 4259 ntAPPRIS P1 TSL 2 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 CDH24-204ENST00000487137 3438 ntAPPRIS P1 TSL 5 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 PCDH7-201ENST00000361762 6403 ntAPPRIS P3 TSL 1 (best) BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC16.83■□□□□ 0.28
PCDHB11Q9Y5F2 OGFR-201ENST00000290291 2410 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 CXXC1-212ENST00000589940 2242 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 TUBB2B-201ENST00000259818 2020 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 SGCE-206ENST00000445866 1666 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 BCL2L11-201ENST00000308659 1522 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 ETV2-204ENST00000403402 1335 ntAPPRIS P3 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 ELOF1-201ENST00000252445 1019 ntAPPRIS P1 TSL 2 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 OPN1LW-201ENST00000369951 1261 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 AC078883.2-201ENST00000441212 558 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 URGCP-206ENST00000446958 365 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 PRYP5-201ENST00000451909 266 ntBASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 AP005019.1-201ENST00000545254 664 ntTSL 3 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 LINC01842-201ENST00000588275 768 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 AP001160.2-201ENST00000596071 487 ntBASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 MTDHP5-201ENST00000598980 586 ntBASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 USP7-201ENST00000344836 5412 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 FAM9B-202ENST00000362066 2047 ntTSL 2 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.28
PCDHB11Q9Y5F2 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
PCDHB11Q9Y5F2 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 40.7 ms