Protein–RNA interactions for Protein: Q9Y3T6

R3HCC1, R3H and coiled-coil domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 440 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3HCC1Q9Y3T6 MTA1-203ENST00000406191 2770 ntAPPRIS P5 TSL 2 BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 NAA30-204ENST00000556492 7644 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 MEGF6-201ENST00000294599 4501 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 CRTC3-201ENST00000268184 2537 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 WNT9B-201ENST00000290015 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 ANKRD24-206ENST00000600132 4026 ntAPPRIS P2 TSL 5 BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 TRPC6-202ENST00000348423 2448 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 BCL2L10-201ENST00000260442 1249 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 FAM187B-201ENST00000324675 1184 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 PCED1CP-201ENST00000419887 785 ntBASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 AL603832.1-201ENST00000421943 449 ntTSL 5 BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 MYD88-206ENST00000443433 914 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 AP003733.1-201ENST00000491725 852 ntBASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 AC027682.5-201ENST00000567122 530 ntTSL 3 BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 AC010422.3-201ENST00000597692 838 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 CHAD-203ENST00000508540 1789 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 PDE1C-202ENST00000396182 2420 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 AP2A2-201ENST00000332231 4656 ntAPPRIS ALT1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 MMP25-201ENST00000336577 3554 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
R3HCC1Q9Y3T6 RGL2-247ENST00000497454 3278 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 RUSC1-205ENST00000368354 3114 ntTSL 2 BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 COL23A1-202ENST00000407622 2329 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 KRT18P55-202ENST00000578578 1546 ntBASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 LONRF3-201ENST00000304778 2989 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 SLC29A1-209ENST00000427851 2171 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 ZFAND5-204ENST00000376960 2686 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 NKX2-2-201ENST00000377142 2092 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 SH2B1-201ENST00000322610 3095 ntTSL 2 BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 TRPV4-205ENST00000537083 2436 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 GSTO2-201ENST00000338595 1179 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 DNMT3A-205ENST00000402667 2300 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 LINC02228-204ENST00000642115 2962 ntBASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 AC006449.5-201ENST00000610658 2098 ntBASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC19.71■□□□□ 0.75
R3HCC1Q9Y3T6 EMD-202ENST00000369842 1379 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 CHMP1A-201ENST00000397901 2483 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 LINC00884-202ENST00000448892 2680 ntTSL 5 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 HDAC8-206ENST00000373571 2133 ntTSL 5 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 SULT1A2-204ENST00000533150 1991 ntTSL 2 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 MAN2A2-216ENST00000559717 6704 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 MAGI3-204ENST00000369617 3911 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 AC007381.1-201ENST00000457668 2005 ntTSL 5 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 AC007952.1-201ENST00000399087 553 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 AC007952.2-202ENST00000399093 556 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 FAM86EP-206ENST00000510506 987 ntBASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 AP002807.1-202ENST00000526897 791 ntTSL 2 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 AC106017.2-202ENST00000628484 536 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 AP000550.4-202ENST00000639755 178 ntBASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 INVS-203ENST00000374921 1654 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 BRF1-201ENST00000327359 2292 ntTSL 2 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 LMNB1-201ENST00000261366 2878 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 TK2-201ENST00000299697 5114 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 NTRK3-202ENST00000355254 2938 ntAPPRIS ALT2 TSL 5 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 SHMT2-232ENST00000557487 1918 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 STUM-201ENST00000366788 7705 ntAPPRIS P2 TSL 5 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 CSNK1A1-202ENST00000377843 2559 ntAPPRIS ALT1 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 CCDC71L-202ENST00000523505 4232 ntAPPRIS P2 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 NIPAL4-201ENST00000311946 3274 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 NKX3-1-201ENST00000380871 3271 ntAPPRIS P3 TSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 IER3-202ENST00000376377 1350 ntBASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC19.7■□□□□ 0.74
R3HCC1Q9Y3T6 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 PRDM5-202ENST00000394435 2492 ntTSL 1 (best) BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 PCDHA1-203ENST00000504120 5263 ntAPPRIS P1 TSL 1 (best) BASIC19.69■□□□□ 0.74
R3HCC1Q9Y3T6 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC19.69■□□□□ 0.74
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms