Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 TUBA4B-203ENST00000490341 1380 ntAPPRIS P1 TSL 2 BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 AK1-203ENST00000373176 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 KRT18P55-202ENST00000578578 1546 ntBASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 IGLL3P-201ENST00000412472 434 ntBASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 AP000695.1-201ENST00000429588 893 ntTSL 3 BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 CEND1P1-201ENST00000451006 455 ntBASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 HELT-204ENST00000515777 841 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 DDIAS-202ENST00000524921 607 ntAPPRIS ALT2 TSL 4 BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 CCND1-203ENST00000536559 553 ntTSL 3 BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 HOPX-214ENST00000556614 1138 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 AC023141.13-201ENST00000604991 943 ntBASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 DMKN-209ENST00000429837 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 SPPL2C-201ENST00000329196 2238 ntAPPRIS P1 BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 BCAR1-209ENST00000546196 1340 ntBASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 TAOK2-202ENST00000308893 5169 ntAPPRIS P4 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
SSX2IPQ9Y2D8 TMED9-201ENST00000332598 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
SSX2IPQ9Y2D8 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 GNE-201ENST00000377902 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 C21orf58-203ENST00000397680 2624 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 RASL11A-201ENST00000241463 1543 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 ZCWPW1-201ENST00000360951 2110 ntAPPRIS ALT2 TSL 2 BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 SH3TC1-202ENST00000382521 829 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 KLK14-202ENST00000391802 1133 ntAPPRIS P1 TSL 5 BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 CNN2P11-201ENST00000429351 262 ntBASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 HMGN1P19-201ENST00000436976 333 ntBASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 AC092115.3-201ENST00000575838 592 ntTSL 5 BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 AC010507.1-201ENST00000633895 436 ntBASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 APMAP-201ENST00000217456 2430 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 AC067852.2-201ENST00000590513 2313 ntBASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 FMR1-206ENST00000370477 3437 ntTSL 5 BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 MAGI1-213ENST00000483466 4791 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
SSX2IPQ9Y2D8 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 AC068888.1-203ENST00000546566 1650 ntTSL 2 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 PI4KAP1-204ENST00000612579 1703 ntBASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 SPSB1-202ENST00000357898 1439 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 SEMA6B-201ENST00000586582 3986 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 CD82-202ENST00000342935 967 ntTSL 5 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 ENSA-206ENST00000361631 725 ntTSL 2 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 CKLF-204ENST00000362093 412 ntAPPRIS ALT2 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 AMACR-204ENST00000382085 1195 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 DDT-204ENST00000404092 805 ntTSL 3 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 AC005281.1-201ENST00000433040 911 ntTSL 5 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 DHRS12-203ENST00000444610 1162 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 IQCF3-204ENST00000446775 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 AC074386.1-202ENST00000463561 864 ntBASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 POLD4-207ENST00000531239 584 ntTSL 2 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 KRT19P2-202ENST00000557173 1012 ntBASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 COL8A2-202ENST00000397799 4670 ntAPPRIS P1 TSL 5 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 PPM1E-201ENST00000308249 6542 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 PC-214ENST00000628663 1470 ntTSL 5 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 FLJ13224-201ENST00000313737 1514 ntBASIC18.44■□□□□ 0.54
SSX2IPQ9Y2D8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 DZIP1-203ENST00000361396 7418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 MON1B-202ENST00000439557 1759 ntTSL 2 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 ZBTB10-203ENST00000430430 10132 ntAPPRIS P3 TSL 5 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 TMEM106C-203ENST00000449758 1414 ntTSL 2 BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
SSX2IPQ9Y2D8 FER1L4-210ENST00000615531 5998 ntBASIC18.43■□□□□ 0.54
Retrieved 100 of 98,524 protein–RNA pairs in 56.2 ms