Protein–RNA interactions for Protein: Q9NXG2

THUMPD1, THUMP domain-containing protein 1, humanhuman

Known RBP Predictions only

Length 353 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1Q9NXG2 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 CD1E-214ENST00000452291 745 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 COX5A-202ENST00000562233 441 ntTSL 3 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 COX5A-204ENST00000567270 579 ntTSL 3 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 SHBG-211ENST00000574539 938 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 FXYD7-203ENST00000586063 456 ntAPPRIS ALT2 TSL 3 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 TBC1D9B-220ENST00000630103 303 ntTSL 5 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 TMED3-203ENST00000536821 2265 ntTSL 2 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 AL121758.1-201ENST00000488788 2714 ntAPPRIS P1 TSL 2 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 CCT6P1-202ENST00000442266 1317 ntTSL 2 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 ZSCAN25-201ENST00000262941 1652 ntTSL 1 (best) BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 ZNF397-204ENST00000585800 2046 ntTSL 5 BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 PCIF1-201ENST00000372409 2747 ntAPPRIS P1 TSL 1 (best) BASIC16.18■□□□□ 0.18
THUMPD1Q9NXG2 MIB1-201ENST00000261537 9576 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 AC092053.1-201ENST00000605787 1936 ntBASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 MIER1-206ENST00000371016 1802 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 SURF4-208ENST00000613129 3148 ntTSL 2 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 PDCD2-208ENST00000541970 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 MELTF-201ENST00000296350 3963 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 ZNRF3-201ENST00000402174 2667 ntAPPRIS P3 TSL 2 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 TCF3-212ENST00000588136 2658 ntAPPRIS ALT2 TSL 2 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 IFNAR2-204ENST00000382264 1389 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 AC011840.1-202ENST00000436477 1351 ntTSL 2 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 SH3BP5-202ENST00000383791 2822 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 SRSF12-201ENST00000452027 3599 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 HBZ-201ENST00000252951 755 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 MADCAM1-203ENST00000382683 603 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 ZNF655-215ENST00000440391 1198 ntTSL 2 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 AL807752.6-202ENST00000622933 765 ntAPPRIS P5 TSL 3 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 TMEM229B-201ENST00000357461 4068 ntAPPRIS P1 TSL 2 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 GMPR-201ENST00000259727 1515 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 TTC24-201ENST00000368236 2005 ntAPPRIS P1 TSL 5 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 KDM4B-211ENST00000611640 5703 ntTSL 5 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 SLC7A5-201ENST00000261622 4537 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 BCAN-202ENST00000361588 2563 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 WRAP53-203ENST00000431639 1818 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 WRAP53-204ENST00000457584 1828 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 TNFSF13-205ENST00000396545 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 POLR3E-202ENST00000359210 2469 ntTSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.17■□□□□ 0.18
THUMPD1Q9NXG2 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 CCNL2-203ENST00000408952 1857 ntTSL 5 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 ARFRP1-212ENST00000618838 1623 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 PIR-202ENST00000380421 1539 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 SLC22A1-202ENST00000366963 1948 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 RRBP1-208ENST00000470422 2070 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 KCNK7-202ENST00000342202 1283 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 GUK1-204ENST00000366721 689 ntTSL 3 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 RNASEH2C-202ENST00000527610 835 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 AD001527.2-201ENST00000622994 785 ntBASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 SACS-AS1-201ENST00000443092 2234 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 AL355315.1-201ENST00000370649 1848 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 CFC1-203ENST00000621673 1444 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 MMAB-204ENST00000537236 1342 ntTSL 3 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.16■□□□□ 0.18
THUMPD1Q9NXG2 LIMS2-208ENST00000410011 2335 ntAPPRIS ALT1 TSL 1 (best) BASIC16.16■□□□□ 0.18
Retrieved 100 of 98,524 protein–RNA pairs in 33.8 ms