Protein–RNA interactions for Protein: Q9NWW0

HCFC1R1, Host cell factor C1 regulator 1, humanhuman

Predictions only

Length 138 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1Q9NWW0 MAT2A-202ENST00000409017 1927 ntTSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC1R1Q9NWW0 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC17.7■□□□□ 0.42
HCFC1R1Q9NWW0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC1R1Q9NWW0 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.7■□□□□ 0.42
HCFC1R1Q9NWW0 HS6ST2-203ENST00000406696 1818 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC1R1Q9NWW0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.7■□□□□ 0.42
HCFC1R1Q9NWW0 TUBB3P1-201ENST00000405796 1332 ntBASIC17.7■□□□□ 0.42
HCFC1R1Q9NWW0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.7■□□□□ 0.42
HCFC1R1Q9NWW0 ADGRB1-201ENST00000323289 5527 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC1R1Q9NWW0 GABRB2-202ENST00000353437 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.42
HCFC1R1Q9NWW0 MYZAP-201ENST00000267853 2361 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 CABP2-201ENST00000294288 925 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 CXCL1-201ENST00000395761 1097 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 AL732437.1-201ENST00000442008 595 ntTSL 4 BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 IGHV3-62-201ENST00000520057 340 ntBASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 C19orf33-202ENST00000588605 520 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 RAPH1-201ENST00000308091 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 AL353732.1-201ENST00000569618 1459 ntBASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.69■□□□□ 0.42
HCFC1R1Q9NWW0 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 TNNC2-202ENST00000372557 780 ntTSL 3 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 KLK6-202ENST00000376851 1708 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 MIR943-201ENST00000401286 94 ntBASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 AC055876.3-201ENST00000431496 288 ntBASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 AL512356.2-201ENST00000546955 174 ntBASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 AQP6-203ENST00000551733 849 ntTSL 3 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 AC013565.3-202ENST00000570120 460 ntTSL 2 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 AC011491.2-201ENST00000599584 447 ntTSL 5 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 AC138649.4-201ENST00000612222 287 ntBASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 RAB34-224ENST00000636513 888 ntTSL 5 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 PDE4A-202ENST00000344979 2579 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 ARID1B-220ENST00000636930 8246 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 UGP2-202ENST00000394417 2136 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 GABARAPL1-201ENST00000266458 1957 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
HCFC1R1Q9NWW0 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 RAB37-208ENST00000402449 1560 ntAPPRIS P3 TSL 2 BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 EGFEM1P-202ENST00000431685 1563 ntBASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 AC008677.1-201ENST00000519230 1561 ntBASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 CD276-203ENST00000537340 2439 ntTSL 2 BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 CENPM-205ENST00000404067 905 ntTSL 3 BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 AL513327.2-201ENST00000432703 490 ntTSL 2 BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 SLC25A6P5-201ENST00000435663 894 ntBASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 KLF2P3-201ENST00000451977 1087 ntBASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 SMCO4-204ENST00000527149 472 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 WASHC3-213ENST00000545679 865 ntTSL 2 BASIC17.67■□□□□ 0.42
HCFC1R1Q9NWW0 AC026150.2-201ENST00000564693 1156 ntBASIC17.67■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 65.9 ms