Protein–RNA interactions for Protein: Q9HBX3

SND1-IT1, Uncharacterized protein encoded by SND1-IT1, humanhuman

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-IT1Q9HBX3 AC092068.3-201ENST00000587894 2016 ntBASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 PHLDA1-201ENST00000266671 8069 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 LINC00554-201ENST00000564841 3011 ntBASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 DAGLB-204ENST00000436575 2385 ntTSL 2 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 CCDC155-201ENST00000447857 2378 ntAPPRIS P2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 IPO8-201ENST00000256079 5325 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 EXT1-201ENST00000378204 8270 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 TUBGCP2-203ENST00000368563 4218 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 NDUFS2-202ENST00000392179 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 AMZ2P1-202ENST00000430983 3425 ntTSL 2 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 ARHGEF28-211ENST00000512883 2936 ntTSL 2 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 KHK-202ENST00000260599 2411 ntAPPRIS ALT1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 SVOPL-204ENST00000436657 1420 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 SYNM-201ENST00000328642 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 AC103702.1-201ENST00000548801 2630 ntBASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 YPEL1-201ENST00000339468 4329 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 UNC93B2-201ENST00000285383 730 ntBASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 GXYLT1P6-201ENST00000456472 1187 ntBASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 AC233702.5-201ENST00000584107 538 ntBASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 AC092865.7-201ENST00000641832 219 ntBASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 TMPRSS13-203ENST00000524993 1950 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 ZNF414-202ENST00000393927 2300 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 RAB40B-206ENST00000571995 3859 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 IPPK-201ENST00000287996 4401 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 PBK-203ENST00000522944 1499 ntTSL 2 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 ELP5-202ENST00000356683 2197 ntTSL 5 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 CD34-202ENST00000356522 2874 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 MAST1-201ENST00000251472 4833 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 COG3-201ENST00000349995 4498 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 B3GNT4-206ENST00000546192 2749 ntAPPRIS P1 TSL 2 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 MBD4-202ENST00000393278 1684 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 ALDH3B1-206ENST00000615463 1300 ntTSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 LINC00612-201ENST00000538094 2213 ntTSL 2 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 TINF2-201ENST00000267415 1852 ntAPPRIS P4 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 PPP1R21-202ENST00000294952 3142 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 MYLK3-201ENST00000394809 6911 ntAPPRIS P3 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 RELT-201ENST00000064780 3535 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 LINC02012-201ENST00000608206 1725 ntBASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 B3GLCT-201ENST00000343307 4254 ntAPPRIS P1 TSL 1 (best) BASIC11.55□□□□□ -0.56
SND1-IT1Q9HBX3 HMGA1-201ENST00000311487 1920 ntAPPRIS P4 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 B4GALT4-216ENST00000483209 2494 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 UGT3A2-204ENST00000513300 1924 ntTSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 APAF1-201ENST00000333991 4539 ntTSL 5 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 OGFOD2-202ENST00000397389 2308 ntTSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 PXN-207ENST00000536957 4112 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 NAT6-205ENST00000443842 1820 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 DGKE-204ENST00000572810 1843 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 HDHD2-201ENST00000300605 2212 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 MFSD1-202ENST00000392813 2244 ntTSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 TRIM24-202ENST00000415680 3799 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 ISPD-202ENST00000407010 5524 ntAPPRIS P1 TSL 5 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 UBE3B-202ENST00000342494 5722 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 PEX7-202ENST00000367756 680 ntTSL 3 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 FAM201B-201ENST00000458407 597 ntBASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 PSMD9-208ENST00000542602 516 ntTSL 3 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 AP003071.4-201ENST00000562276 1284 ntBASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 LTBR-207ENST00000539925 1665 ntAPPRIS ALT2 TSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 PTHLH-205ENST00000535992 1891 ntAPPRIS P3 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 COL11A2-203ENST00000374708 6209 ntAPPRIS P2 TSL 5 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 CRY1-201ENST00000008527 3267 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 RGL3-201ENST00000380456 2542 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 PELI3-209ENST00000618547 2508 ntTSL 2 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
SND1-IT1Q9HBX3 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC11.54□□□□□ -0.56
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms