Protein–RNA interactions for Protein: Q9H7N4

SCAF1, Splicing factor, arginine/serine-rich 19, humanhuman

Known RBP Predictions only

Length 1,312 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1Q9H7N4 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF1Q9H7N4 SYNE4-201ENST00000324444 1354 ntAPPRIS P3 TSL 5 BASIC25.7■■□□□ 1.7
SCAF1Q9H7N4 HOXC6-201ENST00000243108 1733 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF1Q9H7N4 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
SCAF1Q9H7N4 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC25.7■■□□□ 1.7
SCAF1Q9H7N4 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC25.7■■□□□ 1.7
SCAF1Q9H7N4 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC25.7■■□□□ 1.7
SCAF1Q9H7N4 MRPS18A-202ENST00000372133 1062 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 RPS27L-202ENST00000411926 528 ntTSL 3 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 AC108718.1-201ENST00000482382 554 ntTSL 4 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 AC105339.3-201ENST00000560043 636 ntBASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 PRELID3A-208ENST00000590956 777 ntTSL 2 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 AC074135.2-201ENST00000600896 510 ntTSL 3 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 AC064836.3-201ENST00000607928 673 ntBASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 AF228730.6-201ENST00000641497 218 ntBASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 AC084121.3-201ENST00000641716 218 ntBASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 AC105233.6-201ENST00000642093 218 ntBASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 RTN1-209ENST00000611068 2647 ntTSL 5 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 AC105020.1-201ENST00000435356 2205 ntBASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 AC009163.2-201ENST00000460606 2125 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 NFATC1-208ENST00000586434 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC25.69■■□□□ 1.7
SCAF1Q9H7N4 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 HIST1H2BD-202ENST00000377777 496 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 PCDHA2-201ENST00000378132 2626 ntAPPRIS ALT2 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 AC013356.2-201ENST00000559730 729 ntTSL 3 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 AC099482.1-201ENST00000563471 481 ntTSL 2 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 MIR4745-201ENST00000577608 62 ntBASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 TIMM13-202ENST00000591871 631 ntTSL 5 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 AC093512.1-201ENST00000617969 520 ntBASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 CXorf67-201ENST00000342995 1929 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 ZBTB22-207ENST00000418724 2645 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 AGO4-201ENST00000373210 7116 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 DDX28-201ENST00000332395 2169 ntAPPRIS P1 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 SMPD1-203ENST00000527275 2188 ntAPPRIS P3 TSL 2 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 PBX1-215ENST00000559240 2866 ntTSL 5 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 GLS2-216ENST00000610413 2296 ntTSL 5 BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 BEGAIN-201ENST00000355173 2674 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
SCAF1Q9H7N4 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 PABPC4-203ENST00000372858 2753 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 MCCD1P2-201ENST00000423228 335 ntBASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 AC138304.1-201ENST00000563841 424 ntTSL 3 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 AC008277.1-203ENST00000594921 1149 ntTSL 5 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 AL355816.2-201ENST00000610049 647 ntBASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 AC092723.2-201ENST00000624955 793 ntBASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 AC087521.4-201ENST00000637427 289 ntTSL 5 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 LSM12-204ENST00000591247 2484 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 BRF1-206ENST00000446501 2858 ntTSL 2 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 CTNNBIP1-203ENST00000377263 3000 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 SLCO6A1-202ENST00000389019 2340 ntTSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 CADPS2-208ENST00000615869 6066 ntAPPRIS ALT1 TSL 5 BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 C2CD4A-201ENST00000355522 3445 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC25.67■■□□□ 1.7
SCAF1Q9H7N4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 ASL-201ENST00000304874 2143 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 MTND2P25-201ENST00000449028 610 ntBASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 TCTN1-208ENST00000471804 718 ntTSL 3 BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 STMN4-207ENST00000523048 1224 ntTSL 2 BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 BDKRB2-201ENST00000539359 1600 ntTSL 2 BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
SCAF1Q9H7N4 UBE2N-201ENST00000318066 5186 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms