Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 MGAT5-204ENST00000481801 651 ntTSL 329.05■■■□□ 2.241e-6■■□□□ 13.3
XRN2Q9H0D6 MGAT5-202ENST00000409645 8252 ntAPPRIS P1 TSL 5 BASIC8.54□□□□□ -1.041e-6■■□□□ 13.3
XRN2Q9H0D6 RPL31-208ENST00000409733 825 ntAPPRIS P3 TSL 1 (best) BASIC27.73■■■□□ 2.035e-8■■□□□ 13.3
XRN2Q9H0D6 RPL31-201ENST00000264258 1865 ntAPPRIS P3 TSL 1 (best) BASIC10.8□□□□□ -0.685e-8■■□□□ 13.3
XRN2Q9H0D6 RPL31-203ENST00000409028 1110 ntTSL 2 BASIC9.41□□□□□ -0.95e-8■■□□□ 13.3
XRN2Q9H0D6 RPL31-202ENST00000409000 641 ntTSL 2 BASIC7.48□□□□□ -1.215e-8■■□□□ 13.3
XRN2Q9H0D6 RPL31-205ENST00000409320 716 ntAPPRIS ALT1 TSL 1 (best) BASIC6.07□□□□□ -1.445e-8■■□□□ 13.3
XRN2Q9H0D6 RPL31-204ENST00000409038 817 ntTSL 2 BASIC5.5□□□□□ -1.535e-8■■□□□ 13.3
XRN2Q9H0D6 RPL31-206ENST00000409650 770 ntAPPRIS ALT1 TSL 2 BASIC5.45□□□□□ -1.545e-8■■□□□ 13.3
XRN2Q9H0D6 RPL31-209ENST00000419276 781 ntTSL 55.32□□□□□ -1.565e-8■■□□□ 13.3
XRN2Q9H0D6 PROC-202ENST00000402125 779 ntTSL 220.95■□□□□ 0.941e-8■■□□□ 13.3
XRN2Q9H0D6 HERC1-207ENST00000560316 577 ntTSL 420.79■□□□□ 0.922e-6■■□□□ 13.3
XRN2Q9H0D6 HERC1-205ENST00000559886 2462 ntTSL 1 (best)13.4□□□□□ -0.262e-6■■□□□ 13.3
XRN2Q9H0D6 HERC1-214ENST00000561400 2215 ntTSL 213.04□□□□□ -0.322e-6■■□□□ 13.3
XRN2Q9H0D6 HERC1-208ENST00000560462 647 ntTSL 28.75□□□□□ -1.012e-6■■□□□ 13.3
XRN2Q9H0D6 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.662e-6■■□□□ 13.3
XRN2Q9H0D6 HERC1-203ENST00000558532 581 ntTSL 32.94□□□□□ -1.942e-6■■□□□ 13.3
XRN2Q9H0D6 PPIL2-205ENST00000446951 1926 ntTSL 1 (best)16.41■□□□□ 0.226e-8■■□□□ 13.3
XRN2Q9H0D6 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.116e-8■■□□□ 13.3
XRN2Q9H0D6 PPIL2-212ENST00000626352 2625 ntTSL 1 (best) BASIC14.09□□□□□ -0.156e-8■■□□□ 13.3
XRN2Q9H0D6 PPIL2-201ENST00000335025 4929 ntAPPRIS P1 TSL 1 (best) BASIC11.93□□□□□ -0.56e-8■■□□□ 13.3
XRN2Q9H0D6 PPIL2-204ENST00000417788 4213 ntTSL 210.41□□□□□ -0.746e-8■■□□□ 13.3
XRN2Q9H0D6 PPIL2-203ENST00000406385 3875 ntAPPRIS P1 TSL 1 (best) BASIC10.18□□□□□ -0.786e-8■■□□□ 13.3
XRN2Q9H0D6 SEPT9-228ENST00000590294 2816 ntAPPRIS ALT2 TSL 5 BASIC15.76■□□□□ 0.111e-6■■□□□ 13.3
XRN2Q9H0D6 SEPT9-201ENST00000329047 4453 ntAPPRIS ALT2 TSL 1 (best) BASIC11.94□□□□□ -0.51e-6■■□□□ 13.3
XRN2Q9H0D6 MAT2A-203ENST00000465151 583 ntTSL 211.74□□□□□ -0.531e-9■■□□□ 13.3
XRN2Q9H0D6 MAT2A-201ENST00000306434 2819 ntAPPRIS P1 TSL 1 (best) BASIC9.97□□□□□ -0.811e-9■■□□□ 13.3
XRN2Q9H0D6 MAT2A-204ENST00000469221 691 ntTSL 27.97□□□□□ -1.131e-9■■□□□ 13.3
XRN2Q9H0D6 MTSS1L-203ENST00000576338 518 ntTSL 320.39■□□□□ 0.853e-17■■□□□ 13.3
XRN2Q9H0D6 TRAF4-203ENST00000394925 702 ntTSL 226.03■■□□□ 1.765e-7■■□□□ 13.3
XRN2Q9H0D6 TRAF4-212ENST00000498540 748 ntTSL 318.21■□□□□ 0.515e-7■■□□□ 13.3
XRN2Q9H0D6 SEPT9-227ENST00000590059 670 ntTSL 523.83■■□□□ 1.411e-6■■□□□ 13.3
XRN2Q9H0D6 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC17.19■□□□□ 0.342e-6■■□□□ 13.3
XRN2Q9H0D6 ASXL1-212ENST00000620121 5374 ntAPPRIS ALT2 TSL 5 BASIC16.83■□□□□ 0.282e-6■■□□□ 13.3
XRN2Q9H0D6 ASXL1-210ENST00000613218 7038 ntAPPRIS ALT2 TSL 5 BASIC16■□□□□ 0.152e-6■■□□□ 13.3
XRN2Q9H0D6 CALR-202ENST00000586760 913 ntTSL 214.44□□□□□ -0.15e-7■■□□□ 13.3
XRN2Q9H0D6 PCK2-209ENST00000559503 826 ntTSL 512.37□□□□□ -0.432e-10■■□□□ 13.3
XRN2Q9H0D6 GLYR1-210ENST00000589389 3606 ntTSL 1 (best)10.99□□□□□ -0.651e-7■■□□□ 13.2
XRN2Q9H0D6 ACIN1-205ENST00000457657 4815 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.272e-7■■□□□ 13.2
XRN2Q9H0D6 ACIN1-201ENST00000262710 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.132e-7■■□□□ 13.2
XRN2Q9H0D6 ACIN1-213ENST00000555053 4173 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.342e-7■■□□□ 13.2
XRN2Q9H0D6 ACIN1-223ENST00000605057 4474 ntTSL 1 (best) BASIC11.43□□□□□ -0.582e-7■■□□□ 13.2
XRN2Q9H0D6 ZNF518B-205ENST00000515072 2623 ntTSL 1 (best)16.48■□□□□ 0.235e-6■■□□□ 13.2
XRN2Q9H0D6 ZNF518B-204ENST00000507515 527 ntTSL 413.44□□□□□ -0.265e-6■■□□□ 13.2
XRN2Q9H0D6 ZNF518B-203ENST00000503068 4196 ntTSL 1 (best)11.03□□□□□ -0.645e-6■■□□□ 13.2
XRN2Q9H0D6 ZNF518B-202ENST00000500268 4145 ntTSL 1 (best)8.79□□□□□ -15e-6■■□□□ 13.2
XRN2Q9H0D6 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.54□□□□□ -1.525e-6■■□□□ 13.2
XRN2Q9H0D6 NFKBIA-204ENST00000555371 690 ntTSL 313.73□□□□□ -0.219e-8■■□□□ 13.2
XRN2Q9H0D6 BCAM-204ENST00000588714 723 ntTSL 217.86■□□□□ 0.456e-16■■□□□ 13.2
XRN2Q9H0D6 ZNF282-202ENST00000470381 733 ntTSL 239.25■■■■□ 3.879e-6■■□□□ 13.2
XRN2Q9H0D6 AES-203ENST00000585557 491 ntTSL 533.82■■■■□ 32e-12■■□□□ 13.2
XRN2Q9H0D6 FAM76B-211ENST00000543641 1379 ntTSL 1 (best)30.97■■■□□ 2.559e-6■■□□□ 13.2
XRN2Q9H0D6 AEN-204ENST00000558327 883 ntTSL 229.39■■■□□ 2.39e-6■■□□□ 13.2
XRN2Q9H0D6 SLC22A31-203ENST00000563595 780 ntTSL 329.24■■■□□ 2.279e-6■■□□□ 13.2
XRN2Q9H0D6 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.4■■■□□ 2.149e-6■■□□□ 13.2
XRN2Q9H0D6 AEN-205ENST00000559528 895 ntTSL 228.19■■■□□ 2.19e-6■■□□□ 13.2
XRN2Q9H0D6 AEN-206ENST00000560174 461 ntTSL 328.13■■■□□ 2.099e-6■■□□□ 13.2
XRN2Q9H0D6 RNF38-208ENST00000488058 582 ntTSL 328.1■■■□□ 2.099e-6■■□□□ 13.2
XRN2Q9H0D6 CPSF4-207ENST00000451876 1644 ntTSL 5 BASIC27.41■■□□□ 1.989e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-226ENST00000581562 571 ntTSL 327.38■■□□□ 1.972e-12■■□□□ 13.2
XRN2Q9H0D6 FAM76B-207ENST00000538316 585 ntTSL 527.24■■□□□ 1.959e-6■■□□□ 13.2
XRN2Q9H0D6 FKBP4-204ENST00000540260 777 ntTSL 327.13■■□□□ 1.939e-6■■□□□ 13.2
XRN2Q9H0D6 PANK2-202ENST00000336066 1843 ntTSL 1 (best)26.95■■□□□ 1.919e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-229ENST00000582356 633 ntTSL 426.9■■□□□ 1.92e-12■■□□□ 13.2
XRN2Q9H0D6 ACADVL-217ENST00000579286 933 ntTSL 326.9■■□□□ 1.92e-12■■□□□ 13.2
XRN2Q9H0D6 ACADVL-208ENST00000577857 566 ntTSL 426.9■■□□□ 1.92e-12■■□□□ 13.2
XRN2Q9H0D6 ACADVL-233ENST00000583312 799 ntTSL 326.9■■□□□ 1.92e-12■■□□□ 13.2
XRN2Q9H0D6 ATP5C1-202ENST00000356708 1163 ntAPPRIS ALT1 TSL 1 (best) BASIC26.53■■□□□ 1.849e-6■■□□□ 13.2
XRN2Q9H0D6 TMEM63B-205ENST00000525294 916 ntTSL 226.47■■□□□ 1.839e-6■■□□□ 13.2
XRN2Q9H0D6 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.24■■□□□ 1.799e-6■■□□□ 13.2
XRN2Q9H0D6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.2■■□□□ 1.799e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-210ENST00000578269 724 ntTSL 225.91■■□□□ 1.742e-12■■□□□ 13.2
XRN2Q9H0D6 ACADVL-238ENST00000584103 555 ntTSL 425.91■■□□□ 1.742e-12■■□□□ 13.2
XRN2Q9H0D6 SRCAP-203ENST00000411466 836 ntTSL 325.9■■□□□ 1.749e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-223ENST00000580263 545 ntTSL 225.82■■□□□ 1.722e-12■■□□□ 13.2
XRN2Q9H0D6 FAM76B-212ENST00000545654 2001 ntTSL 225.75■■□□□ 1.719e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-212ENST00000578421 548 ntTSL 325.7■■□□□ 1.72e-12■■□□□ 13.2
XRN2Q9H0D6 SLC22A31-202ENST00000562916 692 ntTSL 525.67■■□□□ 1.79e-6■■□□□ 13.2
XRN2Q9H0D6 CNN3-202ENST00000394202 1974 ntTSL 2 BASIC25.63■■□□□ 1.699e-6■■□□□ 13.2
XRN2Q9H0D6 CCND1-206ENST00000545484 430 ntTSL 525.56■■□□□ 1.689e-6■■□□□ 13.2
XRN2Q9H0D6 CPSF4-204ENST00000436336 1738 ntAPPRIS ALT1 TSL 1 (best) BASIC25.42■■□□□ 1.669e-6■■□□□ 13.2
XRN2Q9H0D6 GADD45B-203ENST00000586759 517 nt25.25■■□□□ 1.639e-6■■□□□ 13.2
XRN2Q9H0D6 PDPK1-204ENST00000441549 1729 ntTSL 1 (best) BASIC25.23■■□□□ 1.639e-6■■□□□ 13.2
XRN2Q9H0D6 UNK-201ENST00000586217 651 ntTSL 325.04■■□□□ 1.69e-6■■□□□ 13.2
XRN2Q9H0D6 ABCD4-202ENST00000460308 1003 ntTSL 1 (best)24.95■■□□□ 1.589e-6■■□□□ 13.2
XRN2Q9H0D6 PTOV1-205ENST00000595934 1880 nt24.89■■□□□ 1.589e-6■■□□□ 13.2
XRN2Q9H0D6 RPS19-207ENST00000600467 420 ntTSL 224.58■■□□□ 1.539e-6■■□□□ 13.2
XRN2Q9H0D6 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC24.47■■□□□ 1.519e-6■■□□□ 13.2
XRN2Q9H0D6 GADD45B-207ENST00000593043 373 ntTSL 1 (best)24.32■■□□□ 1.489e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-221ENST00000579886 502 ntTSL 524.18■■□□□ 1.462e-12■■□□□ 13.2
XRN2Q9H0D6 SEPT9-214ENST00000586456 545 ntTSL 224.01■■□□□ 1.439e-6■■□□□ 13.2
XRN2Q9H0D6 SLC22A31-206ENST00000614943 1860 ntTSL 5 BASIC23.99■■□□□ 1.439e-6■■□□□ 13.2
XRN2Q9H0D6 SLC22A31-201ENST00000562855 1909 ntAPPRIS P1 TSL 5 BASIC23.94■■□□□ 1.429e-6■■□□□ 13.2
XRN2Q9H0D6 SSUH2-217ENST00000544814 1636 ntAPPRIS ALT2 TSL 2 BASIC23.82■■□□□ 1.49e-6■■□□□ 13.2
XRN2Q9H0D6 OGG1-209ENST00000383826 1069 ntTSL 5 BASIC23.79■■□□□ 1.49e-6■■□□□ 13.2
XRN2Q9H0D6 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC23.72■■□□□ 1.399e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-227ENST00000582056 738 ntTSL 223.57■■□□□ 1.362e-12■■□□□ 13.2
XRN2Q9H0D6 INSIG2-203ENST00000467223 627 ntTSL 523.36■■□□□ 1.339e-6■■□□□ 13.2
XRN2Q9H0D6 ACADVL-206ENST00000577191 1212 ntTSL 223.23■■□□□ 1.312e-12■■□□□ 13.2
XRN2Q9H0D6 ABCD4-208ENST00000475240 546 ntTSL 523.15■■□□□ 1.39e-6■■□□□ 13.2
Retrieved 100 of 21,068 protein–RNA pairs in 215.8 ms