Protein–RNA interactions for Protein: Q9BY10

SLC46A2, Thymic stromal cotransporter homolog, humanhuman

Predictions only

Length 475 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC46A2Q9BY10 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A2Q9BY10 DMKN-201ENST00000339686 1927 ntAPPRIS P3 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A2Q9BY10 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A2Q9BY10 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.58■□□□□ 0.4
SLC46A2Q9BY10 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A2Q9BY10 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A2Q9BY10 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A2Q9BY10 PSMA8-202ENST00000343848 1675 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A2Q9BY10 SLC22A20-204ENST00000530038 1673 ntBASIC17.58■□□□□ 0.4
SLC46A2Q9BY10 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
SLC46A2Q9BY10 SOX11-201ENST00000322002 8719 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
SLC46A2Q9BY10 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 CBLC-202ENST00000341505 1441 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 TOP3BP1-201ENST00000420768 1380 ntBASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 CBX2-201ENST00000269399 1061 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 WLS-203ENST00000370971 700 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 FAM58DP-201ENST00000428076 619 ntBASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 ITPA-203ENST00000455664 729 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 AL355140.1-201ENST00000457328 398 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 RN7SL589P-201ENST00000481268 310 ntBASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 AKR1E2-212ENST00000532248 844 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 FAM177A1-207ENST00000554052 540 ntAPPRIS ALT2 TSL 2 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 AC009053.3-201ENST00000567148 574 ntTSL 4 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 KRT16P2-202ENST00000579062 563 ntTSL 4 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 AL139398.1-201ENST00000638795 1529 ntTSL 5 BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
SLC46A2Q9BY10 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 IL17RC-206ENST00000416074 2342 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 TPGS2-220ENST00000610723 1426 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 PHYH-202ENST00000396913 1732 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 AC116353.5-201ENST00000638148 1699 ntBASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 METTL26-202ENST00000338401 544 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 HLA-DRB6-201ENST00000411500 1235 ntBASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 AC069335.1-201ENST00000489972 472 ntBASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 AL138781.1-202ENST00000563018 775 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 MIR3197-201ENST00000582241 73 ntBASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 WT1-AS_2.1-201ENST00000613208 137 ntBASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 AL138688.1-201ENST00000624851 1594 ntBASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC17.56■□□□□ 0.4
SLC46A2Q9BY10 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 ZFP1-208ENST00000568079 1426 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 ZDHHC4-206ENST00000405731 1348 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 NCOA6-207ENST00000616167 3271 ntAPPRIS ALT2 TSL 5 BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 HNRNPFP1-201ENST00000391730 1133 ntBASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 CLTA-203ENST00000396603 1090 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 HCG4-201ENST00000418983 998 ntBASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 SPCS2P4-201ENST00000436160 681 ntBASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 LINC01143-201ENST00000449073 625 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 SLBP-205ENST00000488267 987 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 IGLL5-201ENST00000526893 1050 ntAPPRIS P2 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 IGLL5-202ENST00000531372 882 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 ERCC1-212ENST00000591636 836 ntTSL 2 BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 AC005759.1-201ENST00000594805 855 ntTSL 3 BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 IRF1-211ENST00000613424 821 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 ZXDB-201ENST00000374888 5894 ntAPPRIS P1 BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 AC090286.1-201ENST00000354432 1489 ntTSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 FST-202ENST00000396947 2538 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 SSB-201ENST00000260956 1709 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 LGMN-211ENST00000555699 1728 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 ATP6V1E1-201ENST00000253413 1402 ntAPPRIS P1 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 B4GALNT2-201ENST00000300404 1906 ntAPPRIS P3 TSL 1 (best) BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC17.55■□□□□ 0.4
SLC46A2Q9BY10 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC46A2Q9BY10 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC17.54■□□□□ 0.4
SLC46A2Q9BY10 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC17.54■□□□□ 0.4
SLC46A2Q9BY10 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms