Protein–RNA interactions for Protein: Q9BU61

NDUFAF3, NADH dehydrogenase [ubiquinone] 1 alpha subcomplex assembly factor 3, humanhuman

Predictions only

Length 184 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFAF3Q9BU61 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 GRB2-202ENST00000316804 3248 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 AP001476.1-201ENST00000451618 2198 ntTSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 CORO2B-201ENST00000261861 3569 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 CORO2B-204ENST00000566799 3566 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 ESPNL-201ENST00000343063 4836 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 AC093677.2-201ENST00000600169 1863 ntBASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 TPPP3-201ENST00000290942 1116 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 COPE-203ENST00000351079 907 ntTSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 ANKRD20A18P-201ENST00000359341 492 ntBASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 TPPP3-202ENST00000393957 1058 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 RNF152P1-201ENST00000397754 604 ntBASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 AC004540.1-203ENST00000421862 907 ntTSL 5 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 AC022616.7-201ENST00000525383 220 ntBASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 AC009065.1-201ENST00000564055 1225 ntBASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 AC140113.3-201ENST00000605663 199 ntBASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 AC141257.4-201ENST00000634557 245 ntBASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 AC136944.6-201ENST00000634818 245 ntBASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 LINC01010-201ENST00000431422 2069 ntTSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 DBN1-201ENST00000292385 3072 ntAPPRIS P4 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 PRDM8-201ENST00000339711 4095 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 IGSF1-204ENST00000370903 4594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 TMC7-201ENST00000304381 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 BNC1-201ENST00000345382 4610 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 TRIM46-210ENST00000545012 2979 ntTSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 TYMS-201ENST00000323224 1327 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 OARD1-202ENST00000424266 1337 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 AHDC1-201ENST00000247087 6334 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 FAM219A-204ENST00000379081 3543 ntTSL 5 BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 SRSF2-203ENST00000392485 2885 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
NDUFAF3Q9BU61 RASA4B-202ENST00000465829 2931 ntAPPRIS ALT1 TSL 1 (best) BASIC13.33□□□□□ -0.27
NDUFAF3Q9BU61 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NDUFAF3Q9BU61 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC13.33□□□□□ -0.27
NDUFAF3Q9BU61 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 VPS26B-202ENST00000525095 1558 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 PELP1-208ENST00000572293 5272 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 CHID1-201ENST00000323578 3374 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 SALL3-202ENST00000537592 6555 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 THOC3-212ENST00000628318 1442 ntTSL 5 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 PDS5A-201ENST00000303538 7176 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 PPP1R7-202ENST00000272983 1954 ntTSL 2 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 MVK-207ENST00000539575 2747 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 TBK1-201ENST00000331710 3256 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 PHB2-202ENST00000440277 996 ntTSL 5 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 AC139887.4-201ENST00000607877 719 ntBASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 TBC1D10C-201ENST00000312390 1497 ntTSL 5 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 TLE3-212ENST00000558201 2766 ntTSL 5 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 NR2C2-201ENST00000323373 2406 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 GPM6A-210ENST00000506894 2614 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 CACNA2D2-203ENST00000423994 5329 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 RTN4RL1-201ENST00000331238 3625 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 ZNF628-203ENST00000598519 3847 ntAPPRIS P2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 MROH1-202ENST00000423230 1712 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 SRRT-217ENST00000618411 2893 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 STX11-201ENST00000367568 1926 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 PNLDC1-207ENST00000610273 1940 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 C14orf79-205ENST00000549240 2503 ntAPPRIS ALT2 TSL 2 BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
NDUFAF3Q9BU61 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 DNASE2-201ENST00000222219 1955 ntAPPRIS P1 TSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC13.32□□□□□ -0.28
NDUFAF3Q9BU61 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC13.32□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms