Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 AC068944.1-201ENST00000514855 1604 ntTSL 2 BASIC17.93■□□□□ 0.46
SMOQ99835 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.93■□□□□ 0.46
SMOQ99835 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 TRIM7-204ENST00000393319 2320 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 U2AF2-201ENST00000308924 1698 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
SMOQ99835 FAM178B-204ENST00000490605 2710 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SMOQ99835 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMOQ99835 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SMOQ99835 AC106820.2-201ENST00000563775 3264 ntBASIC17.92■□□□□ 0.46
SMOQ99835 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC17.92■□□□□ 0.46
SMOQ99835 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMOQ99835 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC17.92■□□□□ 0.46
SMOQ99835 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC17.92■□□□□ 0.46
SMOQ99835 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SMOQ99835 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
SMOQ99835 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMOQ99835 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SMOQ99835 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SMOQ99835 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
SMOQ99835 PMP22-202ENST00000395936 816 ntTSL 3 BASIC17.92■□□□□ 0.46
SMOQ99835 RPP21-221ENST00000428040 594 ntTSL 2 BASIC17.92■□□□□ 0.46
SMOQ99835 AC097532.1-201ENST00000440802 322 ntTSL 2 BASIC17.92■□□□□ 0.46
SMOQ99835 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMOQ99835 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC17.92■□□□□ 0.46
SMOQ99835 LINC02123-201ENST00000514869 885 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMOQ99835 SFTPC-204ENST00000520605 519 ntTSL 3 BASIC17.92■□□□□ 0.46
SMOQ99835 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC17.92■□□□□ 0.46
SMOQ99835 KRT19P2-202ENST00000557173 1012 ntBASIC17.92■□□□□ 0.46
SMOQ99835 FAM181A-205ENST00000557719 1072 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
SMOQ99835 AC126696.3-201ENST00000563993 575 ntTSL 4 BASIC17.92■□□□□ 0.46
SMOQ99835 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC17.92■□□□□ 0.46
SMOQ99835 CROCCP3-203ENST00000589964 255 ntTSL 3 BASIC17.92■□□□□ 0.46
SMOQ99835 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC17.92■□□□□ 0.46
SMOQ99835 ZNF445-205ENST00000617032 1291 ntTSL 5 BASIC17.92■□□□□ 0.46
SMOQ99835 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC17.92■□□□□ 0.46
SMOQ99835 LINC01635-202ENST00000635097 1023 ntTSL 5 BASIC17.92■□□□□ 0.46
SMOQ99835 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC17.92■□□□□ 0.46
SMOQ99835 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
SMOQ99835 FOS-208ENST00000555686 1496 ntTSL 2 BASIC17.92■□□□□ 0.46
SMOQ99835 WDR53-201ENST00000332629 1679 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMOQ99835 AL162586.1-201ENST00000439298 2055 ntTSL 2 BASIC17.92■□□□□ 0.46
SMOQ99835 BCAR1-209ENST00000546196 1340 ntBASIC17.92■□□□□ 0.46
SMOQ99835 FOXD4L1-201ENST00000306507 2491 ntAPPRIS P1 BASIC17.92■□□□□ 0.46
SMOQ99835 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMOQ99835 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.92■□□□□ 0.46
SMOQ99835 UNC5D-202ENST00000404895 3252 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
SMOQ99835 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
SMOQ99835 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 URAHP-203ENST00000517889 1381 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 CTD-3080P12.3-203ENST00000514376 1757 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 MYC-202ENST00000377970 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 AC025580.3-201ENST00000617932 1424 ntBASIC17.91■□□□□ 0.46
SMOQ99835 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC17.91■□□□□ 0.46
SMOQ99835 SFTPC-201ENST00000318561 997 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 RNF121-203ENST00000393713 2132 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 YBX2P1-201ENST00000394192 760 ntBASIC17.91■□□□□ 0.46
SMOQ99835 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SMOQ99835 BX842568.4-201ENST00000421222 227 ntBASIC17.91■□□□□ 0.46
SMOQ99835 SNHG11-205ENST00000421599 1046 ntTSL 3 BASIC17.91■□□□□ 0.46
SMOQ99835 AC004832.2-201ENST00000426397 482 ntBASIC17.91■□□□□ 0.46
SMOQ99835 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC17.91■□□□□ 0.46
SMOQ99835 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SMOQ99835 CYB561D1-208ENST00000528785 1271 ntAPPRIS ALT1 TSL 5 BASIC17.91■□□□□ 0.46
SMOQ99835 AC116021.1-201ENST00000530049 653 ntTSL 3 BASIC17.91■□□□□ 0.46
SMOQ99835 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC17.91■□□□□ 0.46
SMOQ99835 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC17.91■□□□□ 0.46
SMOQ99835 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC17.91■□□□□ 0.46
SMOQ99835 AC002347.1-201ENST00000569543 541 ntBASIC17.91■□□□□ 0.46
SMOQ99835 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 H3F3B-208ENST00000589599 576 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
SMOQ99835 TEX264-216ENST00000614067 1174 ntAPPRIS ALT2 TSL 3 BASIC17.91■□□□□ 0.46
SMOQ99835 MRFAP1-205ENST00000617365 2112 ntTSL 5 BASIC17.91■□□□□ 0.46
SMOQ99835 CCDC189-204ENST00000541260 1531 ntTSL 5 BASIC17.91■□□□□ 0.46
SMOQ99835 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
SMOQ99835 INPP4A-205ENST00000409851 3365 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC17.91■□□□□ 0.46
SMOQ99835 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
SMOQ99835 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
SMOQ99835 CD72-211ENST00000612238 1424 ntAPPRIS ALT2 TSL 5 BASIC17.9■□□□□ 0.46
SMOQ99835 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC17.9■□□□□ 0.46
SMOQ99835 YAP1-201ENST00000282441 5386 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMOQ99835 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMOQ99835 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMOQ99835 AC092068.3-201ENST00000587894 2016 ntBASIC17.9■□□□□ 0.46
SMOQ99835 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMOQ99835 PRKN-202ENST00000366892 1505 ntTSL 5 BASIC17.9■□□□□ 0.46
SMOQ99835 NPB-201ENST00000333383 704 ntAPPRIS P2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMOQ99835 ROMO1-201ENST00000336695 496 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMOQ99835 SGO2-202ENST00000409203 1041 ntAPPRIS ALT2 TSL 1 (best) BASIC17.9■□□□□ 0.46
SMOQ99835 PRR29-203ENST00000425164 1266 ntTSL 2 BASIC17.9■□□□□ 0.46
SMOQ99835 MMP17-203ENST00000535004 719 ntTSL 3 BASIC17.9■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 52.2 ms