Protein–RNA interactions for Protein: Q99618

CDCA3, Cell division cycle-associated protein 3, humanhuman

Predicted RBP Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3Q99618 HLA-V-201ENST00000429037 534 ntBASIC17.67■□□□□ 0.42
CDCA3Q99618 CD28-203ENST00000458610 705 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA3Q99618 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA3Q99618 KRT18P34-201ENST00000488218 1270 ntBASIC17.67■□□□□ 0.42
CDCA3Q99618 FAM212B-207ENST00000534365 1217 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCA3Q99618 CCDC85C-204ENST00000555822 930 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCA3Q99618 MPI-209ENST00000564003 1195 ntTSL 2 BASIC17.67■□□□□ 0.42
CDCA3Q99618 PSMD7-204ENST00000567958 692 ntTSL 3 BASIC17.67■□□□□ 0.42
CDCA3Q99618 MPDU1-223ENST00000582151 728 ntBASIC17.67■□□□□ 0.42
CDCA3Q99618 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA3Q99618 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC17.67■□□□□ 0.42
CDCA3Q99618 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA3Q99618 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA3Q99618 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC17.67■□□□□ 0.42
CDCA3Q99618 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
CDCA3Q99618 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
CDCA3Q99618 AC131009.4-201ENST00000624048 1740 ntBASIC17.67■□□□□ 0.42
CDCA3Q99618 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 FAM20B-201ENST00000263733 5984 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC17.66■□□□□ 0.42
CDCA3Q99618 AC090164.3-201ENST00000610780 2143 ntBASIC17.66■□□□□ 0.42
CDCA3Q99618 APLNR-203ENST00000611099 1789 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
CDCA3Q99618 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC17.66■□□□□ 0.42
CDCA3Q99618 ACOT4-201ENST00000326303 2362 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 CTSD-212ENST00000637815 2003 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDCA3Q99618 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 COX6A1-201ENST00000229379 572 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 TOMM5-201ENST00000321301 751 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 VHLL-201ENST00000339922 676 ntAPPRIS P1 BASIC17.66■□□□□ 0.42
CDCA3Q99618 MORN4-202ENST00000370635 419 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 AC008443.3-201ENST00000412295 549 ntTSL 4 BASIC17.66■□□□□ 0.42
CDCA3Q99618 AL451069.2-201ENST00000428814 297 ntTSL 3 BASIC17.66■□□□□ 0.42
CDCA3Q99618 AP003068.1-201ENST00000528887 544 ntTSL 4 BASIC17.66■□□□□ 0.42
CDCA3Q99618 IFI27-210ENST00000616764 716 ntAPPRIS P2 TSL 2 BASIC17.66■□□□□ 0.42
CDCA3Q99618 IFI27-213ENST00000620066 719 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 FAM92A-219ENST00000620645 1014 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDCA3Q99618 SRGAP2C-201ENST00000304465 1477 ntTSL 5 BASIC17.66■□□□□ 0.42
CDCA3Q99618 SRGAP2-201ENST00000419187 1477 ntTSL 5 BASIC17.66■□□□□ 0.42
CDCA3Q99618 SRGAP2B-205ENST00000619678 1477 ntTSL 5 BASIC17.66■□□□□ 0.42
CDCA3Q99618 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 ADRA1A-206ENST00000380586 2304 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.66■□□□□ 0.42
CDCA3Q99618 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
CDCA3Q99618 C2orf68-202ENST00000409734 1722 ntTSL 2 BASIC17.66■□□□□ 0.42
CDCA3Q99618 LINC00668-205ENST00000581571 1748 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
CDCA3Q99618 PLEKHA2-208ENST00000616927 1748 ntTSL 5 BASIC17.66■□□□□ 0.42
CDCA3Q99618 FAM172A-206ENST00000509163 1369 ntTSL 2 BASIC17.66■□□□□ 0.42
CDCA3Q99618 PGM1-205ENST00000540265 2345 ntTSL 2 BASIC17.65■□□□□ 0.42
CDCA3Q99618 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 KCTD12-201ENST00000377474 6225 ntAPPRIS P1 BASIC17.65■□□□□ 0.42
CDCA3Q99618 KLK3-201ENST00000326003 1463 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDCA3Q99618 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 EFHD2-201ENST00000375980 2419 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 ADORA2A-214ENST00000611543 2412 ntAPPRIS P1 TSL 5 BASIC17.65■□□□□ 0.42
CDCA3Q99618 POLR1C-201ENST00000304004 1280 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 C9orf24-204ENST00000379127 596 ntTSL 3 BASIC17.65■□□□□ 0.42
CDCA3Q99618 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 CDK2AP2P3-201ENST00000422476 372 ntBASIC17.65■□□□□ 0.42
CDCA3Q99618 AC020915.1-202ENST00000427361 922 ntAPPRIS ALT2 TSL 2 BASIC17.65■□□□□ 0.42
CDCA3Q99618 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 SATB1-217ENST00000493952 626 ntTSL 3 BASIC17.65■□□□□ 0.42
CDCA3Q99618 MRPL36-204ENST00000508987 686 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDCA3Q99618 TRMT112-206ENST00000544844 1106 ntAPPRIS P3 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 COMMD4-207ENST00000562789 746 ntTSL 2 BASIC17.65■□□□□ 0.42
CDCA3Q99618 TP53TG3HP-202ENST00000569755 579 ntBASIC17.65■□□□□ 0.42
CDCA3Q99618 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.65■□□□□ 0.42
CDCA3Q99618 AC012615.6-204ENST00000587741 477 ntTSL 3 BASIC17.65■□□□□ 0.42
CDCA3Q99618 TMEM265-201ENST00000615541 995 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 RPS5-202ENST00000596046 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 MFF-201ENST00000304593 2004 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
CDCA3Q99618 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 EGFEM1P-202ENST00000431685 1563 ntBASIC17.65■□□□□ 0.42
CDCA3Q99618 ATP6V1C2-204ENST00000635370 1578 ntTSL 5 BASIC17.65■□□□□ 0.42
CDCA3Q99618 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
CDCA3Q99618 ZBTB8A-201ENST00000316459 1943 ntTSL 1 (best) BASIC17.64■□□□□ 0.42
CDCA3Q99618 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
CDCA3Q99618 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CDCA3Q99618 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.64■□□□□ 0.41
CDCA3Q99618 KIF1BP-201ENST00000361983 2544 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 AC105202.1-204ENST00000502167 1781 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDCA3Q99618 BX323043.1-201ENST00000641006 1765 ntBASIC17.64■□□□□ 0.41
CDCA3Q99618 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms