Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 B3GALT5-206ENST00000615480 2617 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 FFAR2-201ENST00000246549 2051 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 ARFGAP1-201ENST00000353546 2776 ntAPPRIS P4 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 AC013275.1-201ENST00000413602 2019 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 NTRK2-206ENST00000376213 5560 ntAPPRIS ALT1 TSL 5 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 KIF25-202ENST00000354419 1510 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 CACNA1A-240ENST00000637432 7809 ntAPPRIS ALT2 TSL 5 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 NECTIN1-202ENST00000340882 1059 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 CD82-202ENST00000342935 967 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 PDLIM7-201ENST00000355572 977 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 HSD17B8-203ENST00000374662 990 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 AP002414.1-201ENST00000391405 1147 ntBASIC13.97□□□□□ -0.17
ZNF48Q96MX3 THAP7-202ENST00000399133 1144 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 CCNL2-202ENST00000408918 1186 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 LINC01786-201ENST00000434139 268 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 HOXC-AS3-202ENST00000513165 533 ntTSL 3 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 TUBA1A-203ENST00000546918 984 ntTSL 3 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 AL359317.2-203ENST00000557409 538 ntTSL 4 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 AC004877.2-201ENST00000623941 599 ntBASIC13.97□□□□□ -0.17
ZNF48Q96MX3 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 FARP1-242ENST00000627049 5103 ntTSL 5 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 WDR90-202ENST00000315764 1454 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 SREK1-216ENST00000612404 2128 ntTSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC13.97□□□□□ -0.17
ZNF48Q96MX3 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 CDK11A-203ENST00000357760 2446 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 CDK11A-204ENST00000358779 2419 ntAPPRIS ALT1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 CDK11A-206ENST00000378638 2429 ntTSL 5 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 CDK11A-208ENST00000404249 2449 ntAPPRIS P4 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 AL138688.1-201ENST00000624851 1594 ntBASIC13.96□□□□□ -0.17
ZNF48Q96MX3 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 C8orf49-201ENST00000525043 1968 ntBASIC13.96□□□□□ -0.17
ZNF48Q96MX3 ZMYND11-208ENST00000397962 2150 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 LINC02415-201ENST00000508505 1315 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 PPRC1-201ENST00000278070 5330 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 ACAP3-202ENST00000354700 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 THAP3-202ENST00000307896 1046 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 PFN4-201ENST00000313213 974 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 ANP32E-201ENST00000369114 1048 ntTSL 3 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 METTL21AP1-201ENST00000438852 635 ntBASIC13.96□□□□□ -0.17
ZNF48Q96MX3 AC025183.1-201ENST00000506335 425 ntTSL 4 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 TUBB3-205ENST00000554336 903 ntTSL 3 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 CMTM3-205ENST00000562707 714 ntAPPRIS P1 TSL 3 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 SNHG9-202ENST00000564014 471 ntBASIC13.96□□□□□ -0.17
ZNF48Q96MX3 CEMP1-201ENST00000565480 519 ntAPPRIS ALT2 TSL 3 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 AL590999.1-203ENST00000606829 542 ntTSL 4 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 SLBP-202ENST00000429429 1623 ntTSL 2 BASIC13.96□□□□□ -0.17
ZNF48Q96MX3 SLC27A2-202ENST00000380902 2181 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF48Q96MX3 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF48Q96MX3 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF48Q96MX3 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF48Q96MX3 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF48Q96MX3 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF48Q96MX3 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF48Q96MX3 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF48Q96MX3 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC13.96□□□□□ -0.18
ZNF48Q96MX3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC13.96□□□□□ -0.18
ZNF48Q96MX3 TUSC3-204ENST00000506802 1546 ntTSL 5 BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 DPAGT1-203ENST00000409993 3274 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 KRT18P28-201ENST00000453838 1332 ntBASIC13.95□□□□□ -0.18
ZNF48Q96MX3 BCAR1-209ENST00000546196 1340 ntBASIC13.95□□□□□ -0.18
ZNF48Q96MX3 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 KCNMA1-261ENST00000639486 8850 ntAPPRIS ALT2 TSL 5 BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 ZFHX2-205ENST00000615307 1972 ntTSL 2 BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 PRORY-201ENST00000382764 878 ntAPPRIS P1 TSL 5 BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 DARS-AS1-203ENST00000438432 768 ntTSL 3 BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 LEKR1-211ENST00000498839 616 ntTSL 3 BASIC13.95□□□□□ -0.18
ZNF48Q96MX3 BLOC1S1-201ENST00000547076 837 ntTSL 2 BASIC13.95□□□□□ -0.18
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms