Protein–RNA interactions for Protein: Q96HC4

PDLIM5, PDZ and LIM domain protein 5, humanhuman

Known RBP Predictions only

Length 596 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5Q96HC4 TTLL5-219ENST00000556977 1961 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 BVES-202ENST00000336775 1663 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 DRC3-201ENST00000313838 2064 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 TBX4-201ENST00000240335 2470 ntAPPRIS P3 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 WIPF1-201ENST00000272746 3028 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 ZNF232-201ENST00000250076 2179 ntAPPRIS P3 TSL 5 BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 EWSR1-203ENST00000332050 2552 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 MPP1-202ENST00000369534 2042 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
PDLIM5Q96HC4 FOS-208ENST00000555686 1496 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 LAT2-201ENST00000275635 1869 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 ESR2-205ENST00000358599 1899 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 SLFNL1-205ENST00000439569 2117 ntAPPRIS P3 TSL 2 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 PRODH-202ENST00000334029 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 HOXB6-203ENST00000484302 1960 ntAPPRIS P1 TSL 2 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 RHBDF1-201ENST00000262316 2992 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 JMJD4-206ENST00000615711 2591 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 IL12RB1-201ENST00000322153 1902 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 COLEC11-202ENST00000349077 1259 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 DUSP12-201ENST00000367943 1270 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 VPS13A-AS1-201ENST00000415172 519 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 ARTN-206ENST00000472435 402 ntTSL 3 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 UCHL1-204ENST00000503431 917 ntAPPRIS P1 TSL 3 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 AHSA1-208ENST00000555517 832 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 HDDC3-205ENST00000559898 1024 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 AC002091.2-201ENST00000585297 402 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 TUBB4A-209ENST00000598006 565 ntTSL 2 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 GAPDH-201ENST00000229239 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 RDH13-202ENST00000396247 1987 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 SLC6A9-202ENST00000360584 2330 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 LDLRAP1-201ENST00000374338 2940 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
PDLIM5Q96HC4 ZNF385A-203ENST00000394313 2430 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 HOXA10-202ENST00000396344 1570 ntAPPRIS ALT1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 LSP1-202ENST00000381775 2016 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 KRT8P49-201ENST00000604166 1432 ntBASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 TEX261-201ENST00000272438 3441 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 AL645728.1-201ENST00000366221 2101 ntBASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 KIFC3-203ENST00000445690 3379 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 ZNF140-210ENST00000544426 2340 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 BAG5-202ENST00000337322 1960 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 DDX19B-204ENST00000451014 1608 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 NDUFA11-201ENST00000308961 539 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 PAWRP1-201ENST00000451083 565 ntBASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 MSRA-206ENST00000521209 814 ntTSL 3 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 AF238378.1-201ENST00000526806 358 ntBASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 SDHD-206ENST00000528182 754 ntTSL 3 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 ABO-202ENST00000538324 1147 ntAPPRIS P5 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 EPB41-205ENST00000373797 2402 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 NR4A2-203ENST00000409108 1735 ntTSL 5 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 SLC29A1-202ENST00000371713 2168 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 MGAT1-203ENST00000393340 3077 ntAPPRIS P1 TSL 2 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 INHA-201ENST00000243786 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 CHRNA5-201ENST00000299565 3623 ntAPPRIS P1 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 CRY2-211ENST00000616080 1936 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 INPP5J-202ENST00000400294 2393 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 SLC22A11-203ENST00000377585 2124 ntTSL 2 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 WDR1-205ENST00000502702 1691 ntTSL 5 BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC16.72■□□□□ 0.27
PDLIM5Q96HC4 PPP1R3B-202ENST00000519699 2334 ntAPPRIS P1 TSL 2 BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 AL118508.1-201ENST00000613502 2345 ntBASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
PDLIM5Q96HC4 ELMO3-203ENST00000477898 2281 ntAPPRIS ALT2 TSL 2 BASIC16.71■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms