Protein–RNA interactions for Protein: Q969T4

UBE2E3, Ubiquitin-conjugating enzyme E2 E3, humanhuman

Predictions only

Length 207 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3Q969T4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 AL109955.1-201ENST00000417346 1540 ntTSL 2 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 CDIPT-209ENST00000569956 1532 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 HS3ST3B1-201ENST00000360954 5367 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 WBP2-201ENST00000254806 1944 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 SELENBP1-204ENST00000426705 1928 ntTSL 2 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 PRRT4-205ENST00000489835 2313 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 LIFR-202ENST00000453190 4253 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 PAPD5-202ENST00000436909 4635 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 NANS-201ENST00000210444 1170 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 INSL3-201ENST00000317306 755 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 ZNF81-201ENST00000334937 610 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 MRPL52-202ENST00000355151 1118 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 MRPL52-203ENST00000397496 1111 ntAPPRIS P3 TSL 2 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 AMACR-208ENST00000512079 858 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 PLPP5-214ENST00000531823 875 ntTSL 3 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 TBCB-205ENST00000585746 875 ntTSL 3 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 AL161669.4-201ENST00000634353 732 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 LUC7L2-202ENST00000354926 2645 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 DPEP1-203ENST00000421184 1647 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 AC012313.1-201ENST00000593393 3059 ntBASIC16.51■□□□□ 0.23
UBE2E3Q969T4 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 STX3-203ENST00000529177 1571 ntTSL 2 BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
UBE2E3Q969T4 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 SLC38A6-202ENST00000354886 1730 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 KANSL1L-201ENST00000281772 4754 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 ADCYAP1R1-203ENST00000409363 1889 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 FAM184B-201ENST00000265018 6622 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 DFNA5-203ENST00000409970 2005 ntTSL 5 BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 AC060834.1-201ENST00000443027 2032 ntBASIC16.5■□□□□ 0.23
UBE2E3Q969T4 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 PLEKHF2-201ENST00000315367 2881 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 VIPR2-202ENST00000377633 1491 ntTSL 2 BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 HIP1R-201ENST00000253083 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 RSPH14-201ENST00000216036 1291 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 AL512785.2-202ENST00000367932 830 ntTSL 4 BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 MRPL43-205ENST00000370234 798 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 FGFR3P6-201ENST00000457012 610 ntBASIC16.5■□□□□ 0.23
UBE2E3Q969T4 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 AL353135.1-201ENST00000606729 504 ntBASIC16.5■□□□□ 0.23
UBE2E3Q969T4 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 RIC8B-203ENST00000392839 2440 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 NEO1-206ENST00000558964 4441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 SCARF1-205ENST00000571272 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 DPEP3-201ENST00000268793 2018 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 FRMD8P1-201ENST00000440433 1524 ntBASIC16.5■□□□□ 0.23
UBE2E3Q969T4 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
UBE2E3Q969T4 NADSYN1-201ENST00000319023 2773 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 CNTLN-202ENST00000380647 5576 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 AC080080.1-201ENST00000625121 2420 ntBASIC16.49■□□□□ 0.23
UBE2E3Q969T4 SQOR-208ENST00000568606 1792 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 AC092053.1-201ENST00000605787 1936 ntBASIC16.49■□□□□ 0.23
UBE2E3Q969T4 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 TMEM50B-210ENST00000542230 2375 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 VKORC1-201ENST00000300851 876 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 TYMS-202ENST00000323250 693 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 SLC30A1-201ENST00000367001 5474 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 IPPK-202ENST00000375522 882 ntTSL 3 BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 RAB42-202ENST00000465518 857 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 MRPL21-208ENST00000567045 932 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 AC139887.3-201ENST00000568585 713 ntBASIC16.49■□□□□ 0.23
UBE2E3Q969T4 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
UBE2E3Q969T4 PARVG-205ENST00000422871 3462 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 28.2 ms