Protein–RNA interactions for Protein: Q92738

USP6NL, USP6 N-terminal-like protein, humanhuman

Predictions only

Length 828 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP6NLQ92738 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC19.32■□□□□ 0.68
USP6NLQ92738 ITGB2-204ENST00000397846 422 ntTSL 2 BASIC19.32■□□□□ 0.68
USP6NLQ92738 DANCR-201ENST00000411630 904 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 PSMA8-203ENST00000415576 1280 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 SPDYE7P-202ENST00000420373 878 ntBASIC19.32■□□□□ 0.68
USP6NLQ92738 SPDYE2-202ENST00000432940 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 SPDYE2B-201ENST00000436228 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 SPDYE5-201ENST00000455862 1209 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 MIR210HG-203ENST00000533920 816 ntTSL 2 BASIC19.32■□□□□ 0.68
USP6NLQ92738 RNF151-203ENST00000569714 796 ntAPPRIS P2 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 IL11-202ENST00000585513 1201 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC19.32■□□□□ 0.68
USP6NLQ92738 HLA-DQB1-201ENST00000374943 1656 ntBASIC19.32■□□□□ 0.68
USP6NLQ92738 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 TBXAS1-202ENST00000411653 1792 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
USP6NLQ92738 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.31■□□□□ 0.68
USP6NLQ92738 ANKRD9-201ENST00000286918 6727 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC19.31■□□□□ 0.68
USP6NLQ92738 AC012569.1-201ENST00000591191 1524 ntBASIC19.31■□□□□ 0.68
USP6NLQ92738 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC19.31■□□□□ 0.68
USP6NLQ92738 C9orf64-203ENST00000376344 2443 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 DCBLD2-201ENST00000326840 6122 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 ZNF74-203ENST00000403682 2789 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 WDR4-201ENST00000330317 1471 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 BCS1L-212ENST00000439945 1483 ntAPPRIS P1 TSL 5 BASIC19.31■□□□□ 0.68
USP6NLQ92738 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC19.31■□□□□ 0.68
USP6NLQ92738 MAFF-207ENST00000538999 2365 ntTSL 2 BASIC19.31■□□□□ 0.68
USP6NLQ92738 PIGV-201ENST00000078527 2367 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 MIR346-201ENST00000362234 95 ntBASIC19.31■□□□□ 0.68
USP6NLQ92738 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC19.31■□□□□ 0.68
USP6NLQ92738 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC19.31■□□□□ 0.68
USP6NLQ92738 TMEM191A-202ENST00000419950 663 ntTSL 3 BASIC19.31■□□□□ 0.68
USP6NLQ92738 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC19.31■□□□□ 0.68
USP6NLQ92738 AC092580.3-201ENST00000430932 139 ntBASIC19.31■□□□□ 0.68
USP6NLQ92738 SNHG11-207ENST00000434729 1058 ntTSL 4 BASIC19.31■□□□□ 0.68
USP6NLQ92738 PPP6R2P1-201ENST00000450880 1275 ntBASIC19.31■□□□□ 0.68
USP6NLQ92738 SSNA1-204ENST00000464553 723 ntTSL 2 BASIC19.31■□□□□ 0.68
USP6NLQ92738 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 PHLDA1-202ENST00000602540 5741 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 MYBPH-202ENST00000621380 1772 ntTSL 5 BASIC19.31■□□□□ 0.68
USP6NLQ92738 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC19.31■□□□□ 0.68
USP6NLQ92738 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 GTPBP2-202ENST00000307126 2933 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
USP6NLQ92738 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6NLQ92738 AL034417.2-201ENST00000445300 2044 ntTSL 2 BASIC19.3■□□□□ 0.68
USP6NLQ92738 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP6NLQ92738 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6NLQ92738 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6NLQ92738 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6NLQ92738 GK-202ENST00000378941 458 ntTSL 3 BASIC19.3■□□□□ 0.68
USP6NLQ92738 TNNT3-204ENST00000381558 1258 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
USP6NLQ92738 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC19.3■□□□□ 0.68
USP6NLQ92738 LINC00351-201ENST00000424926 911 ntTSL 3 BASIC19.3■□□□□ 0.68
USP6NLQ92738 C2orf88-205ENST00000443551 692 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6NLQ92738 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.3■□□□□ 0.68
USP6NLQ92738 AP005018.1-201ENST00000525475 301 ntBASIC19.3■□□□□ 0.68
USP6NLQ92738 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC19.3■□□□□ 0.68
USP6NLQ92738 RPL13-214ENST00000567815 712 ntAPPRIS P1 TSL 3 BASIC19.3■□□□□ 0.68
USP6NLQ92738 IGFLR1-205ENST00000588992 730 ntAPPRIS ALT2 TSL 2 BASIC19.3■□□□□ 0.68
USP6NLQ92738 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
USP6NLQ92738 AC098484.3-202ENST00000603943 1011 ntAPPRIS P5 TSL 5 BASIC19.3■□□□□ 0.68
USP6NLQ92738 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.3■□□□□ 0.68
USP6NLQ92738 GCSH-208ENST00000639169 2537 ntTSL 2 BASIC19.3■□□□□ 0.68
USP6NLQ92738 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6NLQ92738 TPT1-AS1-215ENST00000522673 1519 ntTSL 5 BASIC19.3■□□□□ 0.68
USP6NLQ92738 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
USP6NLQ92738 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 SSUH2-202ENST00000341795 1799 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 SARS2-212ENST00000600042 1630 ntTSL 2 BASIC19.29■□□□□ 0.68
USP6NLQ92738 CAMKV-217ENST00000620470 1485 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.29■□□□□ 0.68
USP6NLQ92738 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 POP7-201ENST00000303151 927 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 CACNB2-206ENST00000377328 1233 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 RPAP3-203ENST00000432584 2133 ntTSL 2 BASIC19.29■□□□□ 0.68
USP6NLQ92738 SNX21-206ENST00000462307 1043 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 ALG1L8P-201ENST00000533887 760 ntBASIC19.29■□□□□ 0.68
USP6NLQ92738 MCUR1-201ENST00000379170 5471 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.29■□□□□ 0.68
USP6NLQ92738 TEAD4-202ENST00000359864 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC19.29■□□□□ 0.68
USP6NLQ92738 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC19.29■□□□□ 0.68
USP6NLQ92738 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
USP6NLQ92738 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC19.29■□□□□ 0.68
USP6NLQ92738 CAMKV-204ENST00000466940 1475 ntTSL 2 BASIC19.28■□□□□ 0.68
USP6NLQ92738 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 TCAP-201ENST00000309889 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
USP6NLQ92738 CGREF1-206ENST00000405600 1346 ntAPPRIS P2 TSL 4 BASIC19.28■□□□□ 0.68
USP6NLQ92738 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.28■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 50.5 ms