Protein–RNA interactions for Protein: Q8WW43

APH1B, Gamma-secretase subunit APH-1B, humanhuman

Predictions only

Length 257 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APH1BQ8WW43 WWTR1-204ENST00000467467 1603 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
APH1BQ8WW43 SHANK1-201ENST00000293441 6643 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 SLC6A9-204ENST00000372307 2162 ntTSL 2 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 CRAT-201ENST00000318080 2763 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 CIAPIN1-209ENST00000567518 2016 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 EPS8L2-201ENST00000318562 3148 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 FLVCR1-AS1-201ENST00000356684 2525 ntTSL 2 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 NSMF-205ENST00000371474 3571 ntAPPRIS ALT1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 NSMF-208ENST00000437259 3577 ntAPPRIS ALT1 TSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 CLEC18B-201ENST00000339953 1865 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 NOTCH2NL-201ENST00000362074 1874 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 CLEC18C-202ENST00000536907 1865 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 ADAMTSL4-204ENST00000369041 2908 ntTSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 ZNF7-207ENST00000528372 2905 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 AQP3-201ENST00000297991 1849 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 TPM1-205ENST00000357980 1800 ntTSL 2 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 FCGBP-203ENST00000620799 4926 ntTSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 NKAIN4-201ENST00000370307 793 ntTSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 IGHGP-201ENST00000390555 1178 ntBASIC15.53■□□□□ 0.08
APH1BQ8WW43 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 ECEL1P3-201ENST00000427961 737 ntBASIC15.53■□□□□ 0.08
APH1BQ8WW43 TSPY7P-201ENST00000431358 1114 ntBASIC15.53■□□□□ 0.08
APH1BQ8WW43 RASA4DP-201ENST00000460726 1199 ntBASIC15.53■□□□□ 0.08
APH1BQ8WW43 AC034232.1-201ENST00000506026 1064 ntBASIC15.53■□□□□ 0.08
APH1BQ8WW43 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 C16orf74-203ENST00000602675 744 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 EML2-AS1-203ENST00000623430 886 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 RANBP3-220ENST00000591092 1783 ntAPPRIS ALT2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 OAZ2-207ENST00000560258 1744 ntTSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 ADGRB2-202ENST00000373658 5414 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 RUNX2-201ENST00000359524 5390 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 C12orf65-201ENST00000253233 2073 ntAPPRIS P2 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 ZNF408-201ENST00000311764 2442 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 C12orf66-204ENST00000544871 2441 ntTSL 2 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 SLC9A5-201ENST00000299798 3736 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
APH1BQ8WW43 GK2-201ENST00000358842 1942 ntAPPRIS P1 BASIC15.53■□□□□ 0.08
APH1BQ8WW43 SLC22A12-201ENST00000336464 1854 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 CACFD1-201ENST00000291722 2688 ntTSL 2 BASIC15.52■□□□□ 0.08
APH1BQ8WW43 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 EIF2B4-212ENST00000622434 1771 ntTSL 5 BASIC15.52■□□□□ 0.08
APH1BQ8WW43 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 IDS-202ENST00000370441 1399 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 TRIM7-203ENST00000393315 2851 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 APH1A-204ENST00000414276 1718 ntTSL 2 BASIC15.52■□□□□ 0.08
APH1BQ8WW43 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.08
APH1BQ8WW43 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC15.52■□□□□ 0.08
APH1BQ8WW43 HMGA1P5-201ENST00000412453 271 ntBASIC15.52■□□□□ 0.08
APH1BQ8WW43 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC15.52■□□□□ 0.08
APH1BQ8WW43 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC15.52■□□□□ 0.08
APH1BQ8WW43 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC15.52■□□□□ 0.08
APH1BQ8WW43 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC15.52■□□□□ 0.08
APH1BQ8WW43 IFNL4-202ENST00000616270 1132 ntAPPRIS ALT2 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 AC010947.1-201ENST00000623454 693 ntBASIC15.52■□□□□ 0.08
APH1BQ8WW43 GLDC-219ENST00000640208 420 ntTSL 2 BASIC15.52■□□□□ 0.08
APH1BQ8WW43 ANKRD20A8P-203ENST00000641373 517 ntBASIC15.52■□□□□ 0.08
APH1BQ8WW43 KIFC1-211ENST00000428849 2706 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 PTBP1-202ENST00000350092 3069 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 CKMT2-202ENST00000424301 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.08
APH1BQ8WW43 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1BQ8WW43 DAP-201ENST00000230895 2339 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1BQ8WW43 GHDC-201ENST00000301671 2650 ntAPPRIS P1 TSL 2 BASIC15.52■□□□□ 0.07
APH1BQ8WW43 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1BQ8WW43 MTG1-201ENST00000317502 1560 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1BQ8WW43 SIGLEC10-201ENST00000339313 2256 ntAPPRIS P3 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1BQ8WW43 SDCBP2-204ENST00000381812 1550 ntAPPRIS P1 TSL 5 BASIC15.52■□□□□ 0.07
APH1BQ8WW43 MARK3-204ENST00000416682 2969 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
APH1BQ8WW43 CALD1-204ENST00000417172 1915 ntTSL 5 BASIC15.52■□□□□ 0.07
APH1BQ8WW43 CDK1-204ENST00000448257 1948 ntAPPRIS ALT1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1BQ8WW43 POTEE-204ENST00000613282 1926 ntTSL 5 BASIC15.52■□□□□ 0.07
APH1BQ8WW43 POTEI-202ENST00000615053 1926 ntTSL 5 BASIC15.52■□□□□ 0.07
APH1BQ8WW43 LINC00599-203ENST00000519461 2922 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
APH1BQ8WW43 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
APH1BQ8WW43 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
APH1BQ8WW43 NTRK2-207ENST00000376214 5608 ntAPPRIS P3 TSL 5 BASIC15.52■□□□□ 0.07
APH1BQ8WW43 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC15.52■□□□□ 0.07
APH1BQ8WW43 LRRC29-201ENST00000393992 1468 ntAPPRIS P1 TSL 1 (best) BASIC15.52■□□□□ 0.07
Retrieved 100 of 98,524 protein–RNA pairs in 64 ms