Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 SNURF-201ENST00000338327 331 ntAPPRIS P1 TSL 5 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 RALY-AS1-203ENST00000440595 660 ntTSL 3 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 AC068587.10-201ENST00000641210 219 ntBASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 AGAP3-202ENST00000397238 3225 ntAPPRIS P2 TSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 AC012414.7-201ENST00000621235 1507 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 SIL1-213ENST00000509534 1714 ntTSL 5 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 AURKAIP1-201ENST00000321751 798 ntAPPRIS P1 TSL 2 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 PP14571-201ENST00000404327 934 ntTSL 2 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 RNF216P1-213ENST00000494947 946 ntTSL 2 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 AC105339.1-202ENST00000559535 1283 ntTSL 5 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 IFT20-214ENST00000585089 1071 ntTSL 1 (best) BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 NDUFS7-218ENST00000618074 688 ntTSL 5 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 TMEM114-205ENST00000624696 560 ntTSL 2 BASIC11.38□□□□□ -0.59
ALMS1Q8TCU4 NFYC-210ENST00000425457 1536 ntTSL 2 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 CCDC105-201ENST00000292574 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 Z82214.2-201ENST00000420269 531 ntTSL 4 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 TMEM176B-202ENST00000429904 1206 ntAPPRIS P1 TSL 2 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 AC106772.2-201ENST00000515085 442 ntTSL 3 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 OMP-201ENST00000529803 492 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 GNAL-204ENST00000535121 1285 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 AC091167.2-201ENST00000579581 588 ntBASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 CYP2A7P1-201ENST00000595391 815 ntBASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 TUBB1P2-201ENST00000422712 1306 ntBASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 TUBB1P1-201ENST00000503144 1300 ntBASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 EIF5A-206ENST00000571955 1366 ntAPPRIS P1 TSL 5 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 SRPK3-201ENST00000370100 1717 ntAPPRIS ALT2 TSL 5 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 SLC18A1-203ENST00000381608 1419 ntTSL 5 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 PABPN1L-201ENST00000411789 873 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 CCDC90B-202ENST00000455220 1550 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 TDH-201ENST00000525246 1357 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 LINC00896-202ENST00000609602 2128 ntBASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 AC018665.1-201ENST00000622927 1362 ntBASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 AC120049.1-201ENST00000592638 2065 ntTSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 NR2E3-204ENST00000621736 2032 ntTSL 2 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 SCYL1-202ENST00000279270 1659 ntTSL 5 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 CD81-201ENST00000263645 1520 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 HCST-201ENST00000246551 613 ntAPPRIS P3 TSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 FLYWCH2-201ENST00000293981 915 ntAPPRIS P2 TSL 3 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 C6orf47-AS1-203ENST00000422049 673 ntTSL 2 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 HMGB2-203ENST00000446922 1175 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 SERF1B-208ENST00000515588 792 ntTSL 2 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 AC133552.6-201ENST00000613406 534 ntBASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 SERPINA4-201ENST00000298841 1784 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC11.37□□□□□ -0.59
ALMS1Q8TCU4 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 CMTM3-212ENST00000566121 572 ntTSL 3 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 AC087645.2-202ENST00000586583 643 ntTSL 4 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 DBI-212ENST00000627305 620 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 EML3-217ENST00000531557 2509 ntTSL 5 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 ADM5-201ENST00000420022 1718 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 TMEM161A-206ENST00000587583 1654 ntTSL 5 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 NEIL2-203ENST00000436750 2226 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 EPHX1-206ENST00000614058 1789 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 AC099336.1-201ENST00000417053 1171 ntBASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 THPO-202ENST00000421442 1132 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 AC017116.1-201ENST00000445938 708 ntTSL 3 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 SNHG12-210ENST00000483436 682 ntTSL 3 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 AC243960.2-201ENST00000600996 747 ntBASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 LAMTOR5-208ENST00000614544 846 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 SETD7-204ENST00000506866 1602 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 VEZF1-202ENST00000581208 2321 ntAPPRIS P3 TSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 AFF2-204ENST00000370458 1488 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 TULP2-201ENST00000221399 1754 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 LINC01185-202ENST00000452343 1705 ntTSL 2 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 ZUFSP-201ENST00000368573 1225 ntTSL 5 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 AC133550.2-201ENST00000567731 544 ntTSL 4 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 AC010319.3-201ENST00000597028 470 ntBASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 ECE2-201ENST00000324557 1823 ntTSL 1 (best) BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC11.36□□□□□ -0.59
ALMS1Q8TCU4 TMSB4Y-201ENST00000284856 1669 ntAPPRIS P1 TSL 1 (best) BASIC11.36□□□□□ -0.59
Retrieved 100 of 98,524 protein–RNA pairs in 27.4 ms