Protein–RNA interactions for Protein: Q8IXF0

NPAS3, Neuronal PAS domain-containing protein 3, humanhuman

Predictions only

Length 933 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS3Q8IXF0 LINC01657-201ENST00000457217 1809 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS3Q8IXF0 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS3Q8IXF0 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS3Q8IXF0 SYBU-224ENST00000529690 1983 ntAPPRIS ALT2 TSL 2 BASIC17.69■□□□□ 0.42
NPAS3Q8IXF0 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS3Q8IXF0 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC17.69■□□□□ 0.42
NPAS3Q8IXF0 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS3Q8IXF0 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC17.69■□□□□ 0.42
NPAS3Q8IXF0 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 NLGN2-204ENST00000575301 4374 ntAPPRIS P1 TSL 5 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 NOC2LP1-202ENST00000452600 2235 ntBASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 SNX1-213ENST00000561026 1374 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 AC018470.1-201ENST00000624790 3129 ntBASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 RPS6KB1-203ENST00000406116 1982 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 IDUA-210ENST00000514224 2130 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 CABP5-201ENST00000293255 1257 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 LY6G6C-201ENST00000375819 992 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 AL354836.1-201ENST00000414042 681 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 GPS2P2-201ENST00000430745 888 ntBASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 AL022068.1-202ENST00000432171 794 ntTSL 3 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 RNA5SP421-201ENST00000516864 134 ntBASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 AC021744.1-201ENST00000518354 453 ntTSL 3 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 AC051619.7-201ENST00000568314 623 ntBASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 AC005412.3-201ENST00000580309 715 ntBASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 AC138761.1-201ENST00000584393 385 ntBASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 AJ011932.1-201ENST00000621707 465 ntBASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 EGFL6-201ENST00000361306 2398 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 BSG-215ENST00000618006 1329 ntTSL 2 BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC17.68■□□□□ 0.42
NPAS3Q8IXF0 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 TSSK3-201ENST00000373534 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 WDR45-240ENST00000635003 1376 ntTSL 3 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 ANXA8-203ENST00000583874 1860 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 AHRR-209ENST00000512529 1912 ntTSL 5 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 OCIAD1-213ENST00000508293 1423 ntAPPRIS P1 TSL 5 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 OSTC-201ENST00000361564 1077 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 RPL30-202ENST00000396070 440 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 FAM221A-202ENST00000409192 888 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 SPCS2P4-201ENST00000436160 681 ntBASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 AC069262.1-201ENST00000539058 672 ntBASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 LINC02387-201ENST00000541749 868 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 TMEM88-202ENST00000574668 510 ntTSL 2 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 C19orf25-207ENST00000588871 2128 ntTSL 5 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 AP001059.3-201ENST00000619053 235 ntBASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 AL161645.1-201ENST00000622716 1255 ntBASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 KRT6A-201ENST00000330722 2310 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 FXYD6-204ENST00000526014 2171 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 SHKBP1-201ENST00000291842 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 MST1R-214ENST00000613534 2025 ntTSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 SFN-201ENST00000339276 1320 ntAPPRIS P1 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 MFSD2B-202ENST00000406420 1528 ntAPPRIS P2 TSL 5 BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 LRRC42-201ENST00000319223 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.67■□□□□ 0.42
NPAS3Q8IXF0 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 PHC1-212ENST00000543824 4292 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 CSK-201ENST00000220003 2767 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 RALY-203ENST00000375114 6430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 AL590648.2-201ENST00000427949 2225 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 RNF121-201ENST00000361756 2625 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 AC090340.1-201ENST00000620778 4980 ntBASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 PMS2P4-201ENST00000412466 1052 ntBASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 PRRT3-AS1-201ENST00000431558 614 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 TSPAN32-207ENST00000451520 1236 ntAPPRIS ALT2 TSL 2 BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 AC239800.4-201ENST00000603712 296 ntBASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 AC243571.2-201ENST00000615265 628 ntTSL 3 BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 GOLGA2-215ENST00000639983 1038 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 PRRT2-205ENST00000567659 1470 ntTSL 2 BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 CBX2-202ENST00000310942 4644 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.66■□□□□ 0.42
NPAS3Q8IXF0 BCL2-203ENST00000589955 5011 ntBASIC17.66■□□□□ 0.42
Retrieved 100 of 98,524 protein–RNA pairs in 55.3 ms