Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 MTHFD1L-211ENST00000611279 3475 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 FTMT-201ENST00000321339 879 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 RESP18-201ENST00000333527 795 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 RBCK1-206ENST00000400247 790 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 FOXD3-AS1-201ENST00000418244 941 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 KRT16P4-201ENST00000453883 522 ntBASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 AC132938.3-201ENST00000579095 357 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 NT5C-211ENST00000582170 653 ntTSL 3 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 CCDC61-202ENST00000594087 1017 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 COPE-211ENST00000600932 1144 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 SATB1-201ENST00000338745 7810 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 ZYG11A-202ENST00000371532 3942 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 BEND4-202ENST00000504360 8692 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 DCST1-202ENST00000368419 2207 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 NKAIN1-201ENST00000373736 2589 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 AC097637.2-201ENST00000624096 1997 ntBASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 COTL1-203ENST00000564057 1677 ntTSL 5 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 MAIP1-202ENST00000392290 1386 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 MREG-205ENST00000620139 2618 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 PAX4-202ENST00000341640 2010 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
CDKL3Q8IVW4 HEYL-201ENST00000372852 3661 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 ALDH3A1-205ENST00000444455 1771 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 PLCD3-212ENST00000619929 6107 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 ADGRG2-202ENST00000354791 4494 ntTSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 BLOC1S5-202ENST00000397457 2684 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 MED16-201ENST00000269814 1199 ntTSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 HDAC11-202ENST00000402259 1000 ntTSL 3 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 MIR1224-201ENST00000408193 85 ntBASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 CHEK1-202ENST00000427383 1670 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 PACRGL-202ENST00000360916 2073 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 EVA1A-205ENST00000410113 1747 ntAPPRIS P2 TSL 3 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 APBA2-207ENST00000558402 4031 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 GGT6-203ENST00000573591 1730 ntTSL 4 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 MADCAM1-204ENST00000587541 1723 ntTSL 2 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 KCNQ2-215ENST00000629241 2853 ntTSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 FGFBP1-201ENST00000382333 1359 ntAPPRIS P1 TSL 3 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 SSFA2-201ENST00000320370 4965 ntAPPRIS P3 TSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 FCHO1-201ENST00000252771 3118 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
CDKL3Q8IVW4 ADAM22-202ENST00000398201 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 PLPPR4-202ENST00000370185 5369 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 TRPV4-207ENST00000541794 2475 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 PHF20L1-220ENST00000622263 3375 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 AC004817.3-201ENST00000602957 2129 ntBASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 DFNA5-207ENST00000419307 2265 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 IGLL1-202ENST00000330377 901 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 INSL3-202ENST00000379695 899 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 DNASE1L2-206ENST00000613572 1260 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 HOXC5-201ENST00000312492 1805 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 UCKL1-202ENST00000358711 1845 ntTSL 2 BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 MTA1-201ENST00000331320 2876 ntTSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 ULBP2-201ENST00000367351 1349 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 MDGA2-202ENST00000399232 5075 ntAPPRIS ALT2 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 GBGT1-204ENST00000372043 1935 ntTSL 2 BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 MAP3K9-206ENST00000555993 4449 ntAPPRIS P3 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 KRT84-201ENST00000257951 2092 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
CDKL3Q8IVW4 NSMCE3-201ENST00000332303 4838 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 TCP1-203ENST00000420894 1671 ntTSL 5 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 LRRC58-201ENST00000295628 7903 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 PIGT-257ENST00000640210 1715 ntTSL 5 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 TTC13-202ENST00000366662 3112 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 ASTN2-205ENST00000361209 4622 ntAPPRIS P2 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 AP3D1-201ENST00000345016 4870 ntAPPRIS P3 TSL 1 (best) BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 EIF4H-201ENST00000265753 2679 ntAPPRIS P4 TSL 2 BASIC17.61■□□□□ 0.41
CDKL3Q8IVW4 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 27.3 ms