Protein–RNA interactions for Protein: Q7Z5J4

RAI1, Retinoic acid-induced protein 1, humanhuman

Predicted RBP Predictions only

Length 1,906 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI1Q7Z5J4 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 TEX264-202ENST00000395057 1555 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
RAI1Q7Z5J4 LINC01148-201ENST00000557527 1763 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 RDH12-201ENST00000267502 1833 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 FBXL5-202ENST00000412094 2837 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 STOML1-203ENST00000359750 984 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 RBM43-202ENST00000409092 579 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 PNPO-202ENST00000434554 1196 ntTSL 2 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 FAM86GP-201ENST00000448322 971 ntBASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 BATF2-204ENST00000527716 1230 ntTSL 2 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 DUSP6-204ENST00000547291 1074 ntTSL 2 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 DUX4L17-201ENST00000557360 1267 ntBASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 LINC01128-210ENST00000609139 455 ntTSL 3 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 AL645728.2-201ENST00000641974 660 ntBASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 CGREF1-205ENST00000404694 1376 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 TM2D3-207ENST00000559107 1353 ntTSL 3 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 YAP1-211ENST00000629586 1365 ntTSL 5 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 HLA-F-218ENST00000376861 1544 ntAPPRIS ALT2 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 LYPD5-203ENST00000594013 1519 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 SLC22A5-203ENST00000435065 1746 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 RUSC1-209ENST00000471876 1749 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 ZNF200-202ENST00000396870 2373 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 CD37-201ENST00000323906 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 NUPR2-201ENST00000329309 603 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 ENOSF1-202ENST00000340116 1658 ntTSL 5 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 CSNK2B-203ENST00000375882 948 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 CD81-202ENST00000381036 880 ntTSL 3 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 ACP5-203ENST00000433365 1397 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 CTDSP1-204ENST00000443891 1109 ntTSL 3 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 MAP3K13-212ENST00000448876 1681 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 AL391069.3-201ENST00000455503 618 ntTSL 2 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 NDUFB2-AS1-201ENST00000465466 1648 ntTSL 2 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 C5orf66-202ENST00000507641 547 ntTSL 3 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 TPR-209ENST00000613151 2478 ntTSL 5 BASIC14.53□□□□□ -0.08
RAI1Q7Z5J4 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAI1Q7Z5J4 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAI1Q7Z5J4 OSBPL9-222ENST00000531828 2210 ntTSL 5 BASIC14.52□□□□□ -0.08
RAI1Q7Z5J4 IQCE-204ENST00000404984 2086 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
RAI1Q7Z5J4 FAM153A-203ENST00000440605 1966 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAI1Q7Z5J4 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC14.52□□□□□ -0.08
RAI1Q7Z5J4 MTERF2-201ENST00000240050 1790 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
RAI1Q7Z5J4 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC14.52□□□□□ -0.08
RAI1Q7Z5J4 AC099508.1-201ENST00000499110 1666 ntTSL 4 BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 AC011473.4-202ENST00000250366 1602 ntAPPRIS P5 TSL 2 BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 GRAP2-202ENST00000407075 1304 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 AC002056.1-201ENST00000395613 760 ntBASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 FAM58DP-201ENST00000428076 619 ntBASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 LINC01812-201ENST00000457448 725 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 S100A6-205ENST00000496817 673 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 CCDC74BP1-201ENST00000508880 1123 ntBASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 VPS29-207ENST00000549970 818 ntTSL 3 BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 AQP6-203ENST00000551733 849 ntTSL 3 BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 ERBB2-205ENST00000578199 2526 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 TEAD2-204ENST00000593945 2141 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 ABHD14B-206ENST00000483233 2056 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 SIL1-201ENST00000265195 1895 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 ELL-203ENST00000596124 1852 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC14.52□□□□□ -0.09
RAI1Q7Z5J4 CYP2W1-201ENST00000308919 2304 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 GADD45B-201ENST00000215631 1373 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 TMPRSS5-207ENST00000540540 2001 ntTSL 2 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 ELF2-207ENST00000510408 1965 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 SNCA-205ENST00000394991 1290 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 AL391845.1-202ENST00000449154 437 ntTSL 3 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 AC243562.1-201ENST00000560672 389 ntBASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 LMO7-AS1-202ENST00000568735 467 ntTSL 3 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 MIR3909-201ENST00000579518 119 ntBASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 HERPUD2-202ENST00000396081 3057 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 CEP83-AS1-201ENST00000623122 2482 ntBASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
RAI1Q7Z5J4 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 83.7 ms