Protein–RNA interactions for Protein: P67936

TPM4, Tropomyosin alpha-4 chain, humanhuman

Predictions only

Length 248 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4P67936 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 RASGRP2-206ENST00000377494 2983 ntAPPRIS ALT1 TSL 2 BASIC19.29■□□□□ 0.68
TPM4P67936 IGHGP-201ENST00000390555 1178 ntBASIC19.29■□□□□ 0.68
TPM4P67936 HAGH-202ENST00000397356 2984 ntAPPRIS P3 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 SAPCD2P2-201ENST00000431719 1174 ntBASIC19.29■□□□□ 0.68
TPM4P67936 PDCD6-206ENST00000507528 1088 ntAPPRIS ALT1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 PDCD6-207ENST00000509581 1156 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 DENND3-207ENST00000518347 850 ntTSL 2 BASIC19.29■□□□□ 0.68
TPM4P67936 AC005786.3-201ENST00000589360 565 ntTSL 3 BASIC19.29■□□□□ 0.68
TPM4P67936 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.29■□□□□ 0.68
TPM4P67936 GRM5-205ENST00000455756 7927 ntAPPRIS P3 TSL 2 BASIC19.29■□□□□ 0.68
TPM4P67936 PAFAH1B1-202ENST00000397195 5497 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 AFG3L2-201ENST00000269143 3247 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 AKAP12-201ENST00000253332 6597 ntAPPRIS P4 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 PSD4-201ENST00000245796 5188 ntAPPRIS P2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 DUOX1-201ENST00000321429 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 HDAC5-202ENST00000336057 5040 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 ACSF3-204ENST00000406948 2247 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TPM4P67936 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 UPP1-203ENST00000395564 1375 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 TSHZ1-204ENST00000580243 3582 ntAPPRIS P1 TSL 2 BASIC19.29■□□□□ 0.68
TPM4P67936 AL590627.1-201ENST00000626603 1910 ntTSL 2 BASIC19.29■□□□□ 0.68
TPM4P67936 ITGA7-202ENST00000347027 4084 ntAPPRIS ALT2 TSL 5 BASIC19.29■□□□□ 0.68
TPM4P67936 ADD1-205ENST00000398125 4079 ntTSL 5 BASIC19.29■□□□□ 0.68
TPM4P67936 GTPBP3-201ENST00000324894 2579 ntAPPRIS ALT2 TSL 1 (best) BASIC19.29■□□□□ 0.68
TPM4P67936 SCYL1-214ENST00000533862 2570 ntTSL 5 BASIC19.29■□□□□ 0.68
TPM4P67936 SLC44A3-207ENST00000529450 2045 ntTSL 2 BASIC19.29■□□□□ 0.68
TPM4P67936 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 PTPRC-206ENST00000413409 1338 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM4P67936 RAPGEFL1-209ENST00000544503 2079 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM4P67936 LMAN1-201ENST00000251047 5521 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM4P67936 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 SSSCA1-201ENST00000309328 698 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TPM4P67936 AC068472.1-201ENST00000474589 881 ntBASIC19.28■□□□□ 0.68
TPM4P67936 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM4P67936 AC008610.1-201ENST00000504573 393 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM4P67936 NCAM1-AS1-201ENST00000526229 1081 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM4P67936 ZNF444P1-201ENST00000559497 298 ntBASIC19.28■□□□□ 0.68
TPM4P67936 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC19.28■□□□□ 0.68
TPM4P67936 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 AC092068.3-201ENST00000587894 2016 ntBASIC19.28■□□□□ 0.68
TPM4P67936 SLC22A12-205ENST00000473690 2522 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM4P67936 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 ZNF514-202ENST00000411425 2755 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 TMC6-216ENST00000590602 5268 ntAPPRIS P1 TSL 2 BASIC19.28■□□□□ 0.68
TPM4P67936 OSBPL1A-203ENST00000399441 1887 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 LSS-205ENST00000457828 4390 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 SMUG1-209ENST00000505128 2607 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM4P67936 CACNA1G-205ENST00000360761 7497 ntAPPRIS ALT2 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 OTUD5-204ENST00000428668 1493 ntTSL 2 BASIC19.28■□□□□ 0.68
TPM4P67936 PPP2R2B-206ENST00000453001 2569 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 MAP2K5-201ENST00000178640 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 ALG12-201ENST00000330817 5350 ntAPPRIS P1 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 NECAB2-203ENST00000565691 2064 ntTSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC19.28■□□□□ 0.68
TPM4P67936 SEMA3B-213ENST00000618865 2925 ntAPPRIS P3 TSL 5 BASIC19.28■□□□□ 0.68
TPM4P67936 HMOX2-217ENST00000619528 1829 ntAPPRIS P1 TSL 5 BASIC19.28■□□□□ 0.68
TPM4P67936 CCDC120-202ENST00000496529 2415 ntAPPRIS P3 TSL 2 BASIC19.27■□□□□ 0.68
TPM4P67936 PKN3-201ENST00000291906 3375 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM4P67936 BEND4-203ENST00000611697 1348 ntTSL 2 BASIC19.27■□□□□ 0.68
TPM4P67936 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM4P67936 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM4P67936 PDE4C-201ENST00000262805 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM4P67936 CNGB1-201ENST00000251102 5641 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM4P67936 ST3GAL5-229ENST00000638986 2331 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TPM4P67936 ADAMTS4-201ENST00000367995 1961 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TPM4P67936 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC19.27■□□□□ 0.68
TPM4P67936 TMEM53-201ENST00000372235 890 ntTSL 2 BASIC19.27■□□□□ 0.68
TPM4P67936 PON3-205ENST00000451904 1053 ntTSL 3 BASIC19.27■□□□□ 0.68
TPM4P67936 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
TPM4P67936 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC19.27■□□□□ 0.68
TPM4P67936 AL031432.5-201ENST00000641059 760 ntBASIC19.27■□□□□ 0.68
TPM4P67936 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC19.27■□□□□ 0.68
TPM4P67936 TGFBR2-201ENST00000295754 4621 ntAPPRIS P3 TSL 1 (best) BASIC19.27■□□□□ 0.68
TPM4P67936 YAP1-208ENST00000531439 1490 ntAPPRIS ALT2 TSL 1 (best) BASIC19.27■□□□□ 0.67
TPM4P67936 C11orf49-204ENST00000395460 1916 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TPM4P67936 FBXO24-206ENST00000468962 1901 ntTSL 2 BASIC19.27■□□□□ 0.67
TPM4P67936 TC2N-201ENST00000340892 4708 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
TPM4P67936 SNAP91-205ENST00000439399 4452 ntAPPRIS P2 TSL 5 BASIC19.27■□□□□ 0.67
TPM4P67936 DPYSL3-201ENST00000343218 5476 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
TPM4P67936 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC19.27■□□□□ 0.67
TPM4P67936 AL021453.1-201ENST00000333487 2989 ntTSL 2 BASIC19.26■□□□□ 0.67
TPM4P67936 GBA2-203ENST00000378103 3611 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM4P67936 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC19.26■□□□□ 0.67
TPM4P67936 TLE2-201ENST00000262953 2705 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM4P67936 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
TPM4P67936 NEDD4-202ENST00000435532 5869 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM4P67936 FAM86DP-207ENST00000497543 2152 ntTSL 2 BASIC19.26■□□□□ 0.67
TPM4P67936 PDE4C-207ENST00000594617 4655 ntAPPRIS P3 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM4P67936 MPIG6B-204ENST00000375809 2396 ntAPPRIS ALT2 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM4P67936 DGKZ-201ENST00000318201 3213 ntTSL 2 BASIC19.26■□□□□ 0.67
TPM4P67936 MAP3K20-203ENST00000409176 2572 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM4P67936 TCEAL3-201ENST00000243286 1124 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
TPM4P67936 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC19.26■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 89.4 ms