Protein–RNA interactions for Protein: P63208

SKP1, S-phase kinase-associated protein 1, humanhuman

Predictions only

Length 163 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P63208 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 HNRNPDP1-201ENST00000439535 754 ntBASIC16.31■□□□□ 0.2
SKP1P63208 NDUFB2-208ENST00000471136 499 ntTSL 3 BASIC16.31■□□□□ 0.2
SKP1P63208 SEC23A-206ENST00000553970 574 ntTSL 4 BASIC16.31■□□□□ 0.2
SKP1P63208 DHRS4-205ENST00000558263 1089 ntTSL 5 BASIC16.31■□□□□ 0.2
SKP1P63208 DHRS4L2-207ENST00000558753 556 ntTSL 2 BASIC16.31■□□□□ 0.2
SKP1P63208 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC16.31■□□□□ 0.2
SKP1P63208 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 SBDS-205ENST00000617799 953 ntAPPRIS ALT1 TSL 5 BASIC16.31■□□□□ 0.2
SKP1P63208 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.31■□□□□ 0.2
SKP1P63208 AC148477.8-201ENST00000624298 468 ntBASIC16.31■□□□□ 0.2
SKP1P63208 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 SMAD3-201ENST00000327367 6247 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.31■□□□□ 0.2
SKP1P63208 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC16.31■□□□□ 0.2
SKP1P63208 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 PCDH10-201ENST00000264360 8489 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
SKP1P63208 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
SKP1P63208 LGMN-216ENST00000557434 1797 ntTSL 5 BASIC16.31■□□□□ 0.2
SKP1P63208 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 SKP2-201ENST00000274254 1537 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC16.3■□□□□ 0.2
SKP1P63208 CCDC28B-202ENST00000421922 1415 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 RGS11-203ENST00000359740 1371 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 ANKRD13B-209ENST00000614878 2670 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SKP1P63208 NTRK1-203ENST00000392302 2609 ntTSL 5 BASIC16.3■□□□□ 0.2
SKP1P63208 DHDH-201ENST00000221403 1081 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 SERF1B-202ENST00000380751 703 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 MCFD2-205ENST00000409218 648 ntAPPRIS P1 TSL 2 BASIC16.3■□□□□ 0.2
SKP1P63208 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.3■□□□□ 0.2
SKP1P63208 CCDC74A-202ENST00000409856 1298 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 ELK2BP-201ENST00000415014 1224 ntBASIC16.3■□□□□ 0.2
SKP1P63208 ATP6V0CP3-201ENST00000417255 467 ntBASIC16.3■□□□□ 0.2
SKP1P63208 C9orf147-204ENST00000463223 863 ntTSL 3 BASIC16.3■□□□□ 0.2
SKP1P63208 AC092910.1-201ENST00000482027 1129 ntBASIC16.3■□□□□ 0.2
SKP1P63208 AC079776.4-201ENST00000511039 504 ntBASIC16.3■□□□□ 0.2
SKP1P63208 AC068389.2-201ENST00000529518 430 ntTSL 2 BASIC16.3■□□□□ 0.2
SKP1P63208 FGFR1OP2-206ENST00000546072 956 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 ADAM10-217ENST00000561288 583 ntTSL 3 BASIC16.3■□□□□ 0.2
SKP1P63208 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC16.3■□□□□ 0.2
SKP1P63208 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 MIR7706-201ENST00000613747 67 ntBASIC16.3■□□□□ 0.2
SKP1P63208 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC16.3■□□□□ 0.2
SKP1P63208 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.3■□□□□ 0.2
SKP1P63208 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.3■□□□□ 0.2
SKP1P63208 ZNF853-201ENST00000457543 3857 ntAPPRIS P1 TSL 3 BASIC16.3■□□□□ 0.2
SKP1P63208 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
SKP1P63208 AC005920.1-201ENST00000501718 2054 ntTSL 2 BASIC16.3■□□□□ 0.2
SKP1P63208 PTPN13-204ENST00000436978 8573 ntAPPRIS P4 TSL 5 BASIC16.29■□□□□ 0.2
SKP1P63208 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.29■□□□□ 0.2
SKP1P63208 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 C16orf89-202ENST00000472572 1444 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC16.29■□□□□ 0.2
SKP1P63208 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 CROCCP2-202ENST00000412962 2773 ntBASIC16.29■□□□□ 0.2
SKP1P63208 LRCH3-201ENST00000334859 2258 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 ADAMTS13-206ENST00000371929 4934 ntAPPRIS P4 TSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 USP3-AS1-201ENST00000558831 1784 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 DDX19B-207ENST00000563206 1765 ntTSL 5 BASIC16.29■□□□□ 0.2
SKP1P63208 AL590787.1-201ENST00000568856 1315 ntBASIC16.29■□□□□ 0.2
SKP1P63208 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC16.29■□□□□ 0.2
SKP1P63208 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC16.29■□□□□ 0.2
SKP1P63208 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 GHSR-201ENST00000241256 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 LINC01972-201ENST00000422271 553 ntTSL 3 BASIC16.29■□□□□ 0.2
SKP1P63208 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.29■□□□□ 0.2
SKP1P63208 ZBP1-208ENST00000541799 1041 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SKP1P63208 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.29■□□□□ 0.2
SKP1P63208 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.29■□□□□ 0.2
SKP1P63208 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 AC012366.1-201ENST00000615411 473 ntTSL 5 BASIC16.29■□□□□ 0.2
SKP1P63208 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.29■□□□□ 0.2
SKP1P63208 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 GAS7-203ENST00000432992 4970 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC16.29■□□□□ 0.2
SKP1P63208 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC16.29■□□□□ 0.2
SKP1P63208 C2orf81-202ENST00000612891 1902 ntAPPRIS ALT2 TSL 5 BASIC16.29■□□□□ 0.2
SKP1P63208 APBB1-224ENST00000621678 1907 ntTSL 5 BASIC16.29■□□□□ 0.2
SKP1P63208 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.29■□□□□ 0.2
SKP1P63208 MAFK-201ENST00000343242 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.29■□□□□ 0.2
SKP1P63208 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC16.29■□□□□ 0.2
SKP1P63208 ASPRV1-201ENST00000320256 2177 ntAPPRIS P1 BASIC16.28■□□□□ 0.2
SKP1P63208 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 CREBBP-201ENST00000262367 10803 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 REEP1-208ENST00000538924 1702 ntTSL 5 BASIC16.28■□□□□ 0.2
SKP1P63208 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.28■□□□□ 0.2
SKP1P63208 FOXP3-206ENST00000557224 1371 ntTSL 2 BASIC16.28■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 33.1 ms