Protein–RNA interactions for Protein: P61968

LMO4, LIM domain transcription factor LMO4, humanhuman

Predictions only

Length 165 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4P61968 AC079140.1-201ENST00000508039 487 ntBASIC14□□□□□ -0.17
LMO4P61968 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC14□□□□□ -0.17
LMO4P61968 TMEM33-208ENST00000513702 1092 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
LMO4P61968 AC109322.1-201ENST00000524499 1264 ntBASIC14□□□□□ -0.17
LMO4P61968 PTHLH-207ENST00000539239 890 ntAPPRIS ALT1 TSL 5 BASIC14□□□□□ -0.17
LMO4P61968 DUX4L17-201ENST00000557360 1267 ntBASIC14□□□□□ -0.17
LMO4P61968 RARRES2P8-201ENST00000566335 367 ntBASIC14□□□□□ -0.17
LMO4P61968 PMF1-BGLAP-204ENST00000567140 655 ntTSL 3 BASIC14□□□□□ -0.17
LMO4P61968 CIRBP-204ENST00000585630 870 ntAPPRIS P3 TSL 3 BASIC14□□□□□ -0.17
LMO4P61968 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 SLC22A20-204ENST00000530038 1673 ntBASIC14□□□□□ -0.17
LMO4P61968 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC14□□□□□ -0.17
LMO4P61968 EED-202ENST00000327320 2033 ntTSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 RNFT2-204ENST00000407967 2415 ntTSL 5 BASIC14□□□□□ -0.17
LMO4P61968 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC14□□□□□ -0.17
LMO4P61968 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 C14orf93-205ENST00000397379 1949 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
LMO4P61968 FOS-208ENST00000555686 1496 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC13.99□□□□□ -0.17
LMO4P61968 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 TRIM17-201ENST00000295033 1730 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 ASB10-202ENST00000377867 1738 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LMO4P61968 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 ACP5-212ENST00000592828 1699 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LMO4P61968 AP003356.1-202ENST00000517910 2770 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC13.99□□□□□ -0.17
LMO4P61968 PSMG3-201ENST00000252329 1007 ntAPPRIS P1 TSL 3 BASIC13.99□□□□□ -0.17
LMO4P61968 H3F3C-201ENST00000340398 1057 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
LMO4P61968 IL32-205ENST00000396890 1067 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC13.99□□□□□ -0.17
LMO4P61968 AC092474.2-201ENST00000424288 719 ntBASIC13.99□□□□□ -0.17
LMO4P61968 AC005237.2-201ENST00000434368 219 ntBASIC13.99□□□□□ -0.17
LMO4P61968 AL592309.1-201ENST00000443127 649 ntBASIC13.99□□□□□ -0.17
LMO4P61968 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 RN7SL589P-201ENST00000481268 310 ntBASIC13.99□□□□□ -0.17
LMO4P61968 C8orf46-213ENST00000521495 557 ntTSL 4 BASIC13.99□□□□□ -0.17
LMO4P61968 FXYD6-209ENST00000530956 579 ntAPPRIS P2 TSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 AC109635.5-201ENST00000533593 962 ntBASIC13.99□□□□□ -0.17
LMO4P61968 IL32-223ENST00000534507 1112 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 NR2C2AP-204ENST00000538165 891 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 IL32-227ENST00000548652 812 ntAPPRIS ALT2 TSL 3 BASIC13.99□□□□□ -0.17
LMO4P61968 RNASEK-203ENST00000549393 783 ntTSL 3 BASIC13.99□□□□□ -0.17
LMO4P61968 IL32-233ENST00000552664 731 ntAPPRIS P4 TSL 3 BASIC13.99□□□□□ -0.17
LMO4P61968 AP000275.2-202ENST00000553001 929 ntTSL 5 BASIC13.99□□□□□ -0.17
LMO4P61968 AC090515.4-201ENST00000558042 450 ntTSL 3 BASIC13.99□□□□□ -0.17
LMO4P61968 AC025678.2-201ENST00000562061 970 ntBASIC13.99□□□□□ -0.17
LMO4P61968 AL135744.1-201ENST00000565098 629 ntBASIC13.99□□□□□ -0.17
LMO4P61968 LSM12-202ENST00000585388 942 ntTSL 3 BASIC13.99□□□□□ -0.17
LMO4P61968 AC005330.1-201ENST00000590086 1238 ntTSL 5 BASIC13.99□□□□□ -0.17
LMO4P61968 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 WT1-AS_2.1-201ENST00000613208 137 ntBASIC13.99□□□□□ -0.17
LMO4P61968 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
LMO4P61968 AC009093.7-201ENST00000623853 1223 ntBASIC13.99□□□□□ -0.17
LMO4P61968 CU104787.1-201ENST00000624155 288 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 AL732314.4-201ENST00000627627 515 ntTSL 4 BASIC13.99□□□□□ -0.17
LMO4P61968 SPERT-201ENST00000310521 1613 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 TMEM143-202ENST00000377431 1960 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 CERCAM-213ENST00000612334 1554 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
LMO4P61968 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC13.99□□□□□ -0.17
LMO4P61968 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 FRMD8P1-201ENST00000440433 1524 ntBASIC13.99□□□□□ -0.17
LMO4P61968 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.99□□□□□ -0.17
LMO4P61968 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LMO4P61968 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
LMO4P61968 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
LMO4P61968 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 RAD51D-201ENST00000335858 1353 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 C12orf40-202ENST00000405531 1656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LMO4P61968 NF1-211ENST00000487476 2265 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 PACS2-205ENST00000547217 2809 ntTSL 5 BASIC13.98□□□□□ -0.17
LMO4P61968 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 ELP5-201ENST00000354429 1304 ntAPPRIS P2 TSL 5 BASIC13.98□□□□□ -0.17
LMO4P61968 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LMO4P61968 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 NKX2-6-201ENST00000325017 906 ntAPPRIS P1 TSL 2 BASIC13.98□□□□□ -0.17
LMO4P61968 YIF1B-201ENST00000329420 964 ntTSL 3 BASIC13.98□□□□□ -0.17
LMO4P61968 BLZF1-202ENST00000367807 1295 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 SNHG5-201ENST00000369605 1032 ntTSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 TSSC4-202ENST00000380992 992 ntAPPRIS ALT2 TSL 5 BASIC13.98□□□□□ -0.17
LMO4P61968 METTL21A-202ENST00000406927 1103 ntAPPRIS P1 TSL 1 (best) BASIC13.98□□□□□ -0.17
LMO4P61968 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC13.98□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 47.2 ms