Protein–RNA interactions for Protein: P57729

RAB38, Ras-related protein Rab-38, humanhuman

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB38P57729 CACNA1A-225ENST00000636389 8137 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RAB38P57729 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 PRDM5-212ENST00000515109 2259 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 RUNDC3B-203ENST00000394654 2064 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
RAB38P57729 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 AQP12A-201ENST00000337801 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 CELA2A-201ENST00000359621 919 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 PDHA1-203ENST00000379805 734 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB38P57729 WNT7B-203ENST00000410058 714 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB38P57729 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC16.11■□□□□ 0.17
RAB38P57729 AC108073.2-201ENST00000464002 357 ntBASIC16.11■□□□□ 0.17
RAB38P57729 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB38P57729 AC108751.1-201ENST00000490852 363 ntBASIC16.11■□□□□ 0.17
RAB38P57729 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB38P57729 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.11■□□□□ 0.17
RAB38P57729 HEXIM2-207ENST00000592695 1246 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB38P57729 BX640515.1-201ENST00000617215 977 ntBASIC16.11■□□□□ 0.17
RAB38P57729 FO681492.1-201ENST00000623662 5321 ntAPPRIS P5 TSL 2 BASIC16.11■□□□□ 0.17
RAB38P57729 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
RAB38P57729 TRAF2-201ENST00000247668 2264 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 TLX1-201ENST00000370196 2906 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 MMP9-201ENST00000372330 2336 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 LINC00887-203ENST00000429578 1717 ntTSL 2 BASIC16.11■□□□□ 0.17
RAB38P57729 WDR74-204ENST00000525239 1736 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
RAB38P57729 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
RAB38P57729 AL355987.1-201ENST00000435202 2420 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RAB38P57729 TDRKH-202ENST00000368823 2751 ntAPPRIS ALT1 TSL 2 BASIC16.1■□□□□ 0.17
RAB38P57729 AGXT-201ENST00000307503 1865 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 LSP1-217ENST00000612798 1881 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RAB38P57729 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.1■□□□□ 0.17
RAB38P57729 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
RAB38P57729 RPRD1A-209ENST00000590898 1945 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB38P57729 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 CCDC107-201ENST00000327351 804 ntAPPRIS ALT2 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 RFXANK-203ENST00000407360 1212 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 AC087163.2-201ENST00000457299 853 ntBASIC16.1■□□□□ 0.17
RAB38P57729 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB38P57729 CIPC-205ENST00000555437 566 ntTSL 3 BASIC16.1■□□□□ 0.17
RAB38P57729 ZFPM1-203ENST00000562437 502 ntTSL 2 BASIC16.1■□□□□ 0.17
RAB38P57729 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC16.1■□□□□ 0.17
RAB38P57729 AC120114.3-201ENST00000611923 658 ntBASIC16.1■□□□□ 0.17
RAB38P57729 CLEC11A-203ENST00000617718 1128 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 CMIP-201ENST00000398040 2825 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 LSR-212ENST00000602122 2480 ntAPPRIS ALT2 TSL 2 BASIC16.1■□□□□ 0.17
RAB38P57729 OR2C3-203ENST00000617752 2481 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
RAB38P57729 B3GNT9-201ENST00000449549 2917 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC16.1■□□□□ 0.17
RAB38P57729 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 CAMK2G-205ENST00000372765 1822 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB38P57729 ABHD3-209ENST00000580981 1836 ntTSL 5 BASIC16.1■□□□□ 0.17
RAB38P57729 PNPO-201ENST00000225573 2256 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 GCAT-201ENST00000248924 1497 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
RAB38P57729 SCNN1A-205ENST00000396966 2336 ntTSL 3 BASIC16.1■□□□□ 0.17
RAB38P57729 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RAB38P57729 LRRC71-201ENST00000337428 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RAB38P57729 NFKBIA-201ENST00000216797 1558 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 RGS19-202ENST00000395042 1593 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 THNSL2-202ENST00000343544 2052 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 ALDH3B1-208ENST00000617288 2078 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 NKIRAS1-202ENST00000412028 1605 ntAPPRIS ALT1 TSL 5 BASIC16.09■□□□□ 0.17
RAB38P57729 RBCK1-215ENST00000640614 2599 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB38P57729 SMAD4-201ENST00000342988 8769 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAB38P57729 DMRTC2-204ENST00000596827 1675 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB38P57729 DAPK2-202ENST00000457488 1741 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 STPG3-AS1-201ENST00000612170 1701 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB38P57729 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 FGFR4-203ENST00000393648 2733 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAB38P57729 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB38P57729 METTL26-201ENST00000301686 794 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
RAB38P57729 METTL26-205ENST00000397666 726 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB38P57729 MRPL20P1-201ENST00000400819 433 ntBASIC16.09■□□□□ 0.17
RAB38P57729 PDE6D-202ENST00000409772 672 ntTSL 3 BASIC16.09■□□□□ 0.17
RAB38P57729 AC009947.1-201ENST00000444350 727 ntBASIC16.09■□□□□ 0.17
RAB38P57729 JPH4-203ENST00000544177 1124 ntTSL 2 BASIC16.09■□□□□ 0.17
RAB38P57729 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC16.09■□□□□ 0.17
RAB38P57729 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC16.09■□□□□ 0.17
RAB38P57729 LINC00596-201ENST00000559615 937 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB38P57729 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC16.09■□□□□ 0.17
RAB38P57729 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
RAB38P57729 ZEB1-AS1-209ENST00000607455 559 ntTSL 4 BASIC16.09■□□□□ 0.17
RAB38P57729 Z83851.2-201ENST00000609564 659 ntBASIC16.09■□□□□ 0.17
RAB38P57729 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 PUF60-201ENST00000313352 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 DHRS7-212ENST00000611054 1321 ntTSL 5 BASIC16.09■□□□□ 0.17
RAB38P57729 T-201ENST00000296946 2436 ntAPPRIS P1 TSL 5 BASIC16.09■□□□□ 0.17
RAB38P57729 KLHDC8B-201ENST00000332780 1959 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
RAB38P57729 CSNK2A1-203ENST00000400217 1451 ntTSL 2 BASIC16.09■□□□□ 0.17
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms